Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YGR296C-BYGR296C-B 483 nt4.76□□□□□ -1.65
SUB1P54000 YHL050W-AYHL050W-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YHR219C-AYHR219C-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YIL177W-AYIL177W-A 483 nt4.76□□□□□ -1.65
SUB1P54000 MRPL49YJL096W 486 nt4.76□□□□□ -1.65
SUB1P54000 YJL225W-AYJL225W-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YAL044W-AYAL044W-A 333 nt4.76□□□□□ -1.65
SUB1P54000 YLL066W-AYLL066W-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YLL067W-AYLL067W-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YBL006W-AYBL006W-A 150 nt4.76□□□□□ -1.65
SUB1P54000 YLR466C-AYLR466C-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YLR467C-AYLR467C-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YML133W-BYML133W-B 483 nt4.76□□□□□ -1.65
SUB1P54000 YNL339W-BYNL339W-B 483 nt4.76□□□□□ -1.65
SUB1P54000 YBL113W-AYBL113W-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YOR396C-AYOR396C-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YPL283W-BYPL283W-B 483 nt4.76□□□□□ -1.65
SUB1P54000 YPR204C-AYPR204C-A 483 nt4.76□□□□□ -1.65
SUB1P54000 YBR141W-AYBR141W-A 96 nt4.76□□□□□ -1.65
SUB1P54000 CDC14YFR028C 1656 nt4.76□□□□□ -1.65
SUB1P54000 TRM1YDR120C 1713 nt4.75□□□□□ -1.65
SUB1P54000 GET3YDL100C 1065 nt4.75□□□□□ -1.65
SUB1P54000 YDR355CYDR355C 303 nt4.75□□□□□ -1.65
SUB1P54000 YGR026WYGR026W 837 nt4.75□□□□□ -1.65
SUB1P54000 YIL021C-AYIL021C-A 270 nt4.75□□□□□ -1.65
SUB1P54000 NMD4YLR363C 657 nt4.75□□□□□ -1.65
SUB1P54000 BUD17YNR027W 954 nt4.75□□□□□ -1.65
SUB1P54000 PFA4YOL003C 1137 nt4.75□□□□□ -1.65
SUB1P54000 YOR379CYOR379C 339 nt4.75□□□□□ -1.65
SUB1P54000 snR17asnR17a 333 nt4.75□□□□□ -1.65
SUB1P54000 USV1YPL230W 1176 nt4.75□□□□□ -1.65
SUB1P54000 PEP5YMR231W 3090 nt4.75□□□□□ -1.65
SUB1P54000 GDH2YDL215C 3279 nt4.75□□□□□ -1.65
SUB1P54000 YPR148CYPR148C 1308 nt4.74□□□□□ -1.65
SUB1P54000 PHO5YBR093C 1404 nt4.74□□□□□ -1.65
SUB1P54000 CTM1YHR109W 1758 nt4.74□□□□□ -1.65
SUB1P54000 PCL2YDL127W 927 nt4.74□□□□□ -1.65
SUB1P54000 YDR290WYDR290W 330 nt4.74□□□□□ -1.65
SUB1P54000 DID4YKL002W 699 nt4.74□□□□□ -1.65
SUB1P54000 TFA2YKR062W 987 nt4.74□□□□□ -1.65
SUB1P54000 NIT3YLR351C 876 nt4.74□□□□□ -1.65
SUB1P54000 YOR263CYOR263C 408 nt4.74□□□□□ -1.65
SUB1P54000 DIB1YPR082C 432 nt4.74□□□□□ -1.65
SUB1P54000 POP4YBR257W 840 nt4.74□□□□□ -1.65
SUB1P54000 CLN2YPL256C 1638 nt4.74□□□□□ -1.65
SUB1P54000 GYP6YJL044C 1377 nt4.74□□□□□ -1.65
SUB1P54000 IOC2YLR095C 2439 nt4.74□□□□□ -1.65
SUB1P54000 ZPR1YGR211W 1461 nt4.74□□□□□ -1.65
SUB1P54000 SNF2YOR290C 5112 nt4.74□□□□□ -1.65
SUB1P54000 GPI1YGR216C 1830 nt4.74□□□□□ -1.65
SUB1P54000 SYT1YPR095C 3681 nt4.74□□□□□ -1.65
SUB1P54000 SEC59YMR013C 1560 nt4.74□□□□□ -1.65
SUB1P54000 YPR003CYPR003C 2265 nt4.74□□□□□ -1.65
SUB1P54000 YOL019WYOL019W 1656 nt4.73□□□□□ -1.65
SUB1P54000 OAF3YKR064W 2592 nt4.73□□□□□ -1.65
SUB1P54000 FUN12YAL035W 3009 nt4.73□□□□□ -1.65
SUB1P54000 DDI2YFL061W 678 nt4.73□□□□□ -1.65
SUB1P54000 PUS6YGR169C 1215 nt4.73□□□□□ -1.65
SUB1P54000 YKE4YIL023C 1041 nt4.73□□□□□ -1.65
SUB1P54000 ATP12YJL180C 978 nt4.73□□□□□ -1.65
SUB1P54000 RPL43BYJR094W-A 279 nt4.73□□□□□ -1.65
SUB1P54000 SPO20YMR017W 1194 nt4.73□□□□□ -1.65
SUB1P54000 RRG9YNL213C 645 nt4.73□□□□□ -1.65
SUB1P54000 DDI3YNL335W 678 nt4.73□□□□□ -1.65
SUB1P54000 REX4YOL080C 870 nt4.73□□□□□ -1.65
SUB1P54000 GPI2YPL076W 843 nt4.73□□□□□ -1.65
SUB1P54000 ECM8YBR076W 1065 nt4.73□□□□□ -1.65
SUB1P54000 HRR25YPL204W 1485 nt4.73□□□□□ -1.65
SUB1P54000 EAR1YMR171C 1653 nt4.73□□□□□ -1.65
SUB1P54000 RRB1YMR131C 1536 nt4.72□□□□□ -1.65
SUB1P54000 MET4YNL103W 2019 nt4.72□□□□□ -1.65
SUB1P54000 RPN12YFR052W 825 nt4.72□□□□□ -1.65
SUB1P54000 ADH4YGL256W 1149 nt4.72□□□□□ -1.65
SUB1P54000 MED11YMR112C 396 nt4.72□□□□□ -1.65
SUB1P54000 SAM4YPL273W 978 nt4.72□□□□□ -1.65
SUB1P54000 BSC2YDR275W 708 nt4.71□□□□□ -1.66
SUB1P54000 SLZ1YNL196C 897 nt4.71□□□□□ -1.66
SUB1P54000 CAF20YOR276W 486 nt4.71□□□□□ -1.66
SUB1P54000 YPR169W-AYPR169W-A 219 nt4.71□□□□□ -1.66
SUB1P54000 YPR170W-BYPR170W-B 258 nt4.71□□□□□ -1.66
SUB1P54000 RIB5YBR256C 717 nt4.71□□□□□ -1.66
SUB1P54000 AEP3YPL005W 1821 nt4.71□□□□□ -1.66
SUB1P54000 CYM1YDR430C 2970 nt4.71□□□□□ -1.66
SUB1P54000 RRP8YDR083W 1179 nt4.7□□□□□ -1.66
SUB1P54000 PDS1YDR113C 1122 nt4.7□□□□□ -1.66
SUB1P54000 PDX1YGR193C 1233 nt4.7□□□□□ -1.66
SUB1P54000 GEP4YHR100C 558 nt4.7□□□□□ -1.66
SUB1P54000 EGD2YHR193C 525 nt4.7□□□□□ -1.66
SUB1P54000 FBP1YLR377C 1047 nt4.7□□□□□ -1.66
SUB1P54000 SPN1YPR133C 1233 nt4.7□□□□□ -1.66
SUB1P54000 SLM2YNL047C 1971 nt4.7□□□□□ -1.66
SUB1P54000 ACE2YLR131C 2313 nt4.7□□□□□ -1.66
SUB1P54000 UBX5YDR330W 1503 nt4.7□□□□□ -1.66
SUB1P54000 DRN1YGR093W 1524 nt4.7□□□□□ -1.66
SUB1P54000 AZR1YGR224W 1842 nt4.69□□□□□ -1.66
SUB1P54000 MYO3YKL129C 3819 nt4.69□□□□□ -1.66
SUB1P54000 IMH1YLR309C 2736 nt4.69□□□□□ -1.66
SUB1P54000 TRM12YML005W 1389 nt4.69□□□□□ -1.66
SUB1P54000 PRP11YDL043C 801 nt4.69□□□□□ -1.66
SUB1P54000 YAR019W-AYAR019W-A 333 nt4.69□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms