Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMSP52788 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SMSP52788 ESRRAP2-201ENST00000418437 1549 ntBASIC20.43■□□□□ 0.86
SMSP52788 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMSP52788 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMSP52788 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMSP52788 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 MIR4767-201ENST00000582827 78 ntBASIC20.42■□□□□ 0.86
SMSP52788 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMSP52788 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.41■□□□□ 0.86
SMSP52788 AC097381.1-201ENST00000429019 1296 ntBASIC20.41■□□□□ 0.86
SMSP52788 AC027682.1-201ENST00000562846 899 ntBASIC20.41■□□□□ 0.86
SMSP52788 CA15P2-201ENST00000611168 834 ntBASIC20.41■□□□□ 0.86
SMSP52788 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.41■□□□□ 0.86
SMSP52788 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMSP52788 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.4■□□□□ 0.86
SMSP52788 AL138724.1-201ENST00000606771 1088 ntBASIC20.4■□□□□ 0.86
SMSP52788 AC242852.2-201ENST00000615738 1807 ntBASIC20.4■□□□□ 0.86
SMSP52788 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMSP52788 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.39■□□□□ 0.86
SMSP52788 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMSP52788 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.39■□□□□ 0.86
SMSP52788 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMSP52788 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SMSP52788 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.39■□□□□ 0.85
SMSP52788 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMSP52788 AC137767.1-201ENST00000602918 1920 ntBASIC20.39■□□□□ 0.85
SMSP52788 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMSP52788 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SMSP52788 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 AC011298.3-201ENST00000615796 283 ntBASIC20.38■□□□□ 0.85
SMSP52788 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.38■□□□□ 0.85
SMSP52788 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.38■□□□□ 0.85
SMSP52788 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.37■□□□□ 0.85
SMSP52788 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMSP52788 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SMSP52788 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 SERBP1P1-201ENST00000396021 1160 ntBASIC20.37■□□□□ 0.85
SMSP52788 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.37■□□□□ 0.85
SMSP52788 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.37■□□□□ 0.85
SMSP52788 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMSP52788 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.36■□□□□ 0.85
SMSP52788 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.36■□□□□ 0.85
SMSP52788 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.36■□□□□ 0.85
SMSP52788 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.36■□□□□ 0.85
SMSP52788 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.36■□□□□ 0.85
SMSP52788 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SMSP52788 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.36■□□□□ 0.85
SMSP52788 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMSP52788 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms