Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMSP52788 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SMSP52788 ESRRAP2-201ENST00000418437 1549 ntBASIC20.43■□□□□ 0.86
SMSP52788 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMSP52788 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMSP52788 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMSP52788 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 MIR4767-201ENST00000582827 78 ntBASIC20.42■□□□□ 0.86
SMSP52788 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.42■□□□□ 0.86
SMSP52788 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMSP52788 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.41■□□□□ 0.86
SMSP52788 AC097381.1-201ENST00000429019 1296 ntBASIC20.41■□□□□ 0.86
SMSP52788 AC027682.1-201ENST00000562846 899 ntBASIC20.41■□□□□ 0.86
SMSP52788 CA15P2-201ENST00000611168 834 ntBASIC20.41■□□□□ 0.86
SMSP52788 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.41■□□□□ 0.86
SMSP52788 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMSP52788 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMSP52788 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.4■□□□□ 0.86
SMSP52788 AL138724.1-201ENST00000606771 1088 ntBASIC20.4■□□□□ 0.86
SMSP52788 AC242852.2-201ENST00000615738 1807 ntBASIC20.4■□□□□ 0.86
SMSP52788 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMSP52788 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMSP52788 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.39■□□□□ 0.86
SMSP52788 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMSP52788 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.39■□□□□ 0.86
SMSP52788 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMSP52788 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SMSP52788 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMSP52788 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.39■□□□□ 0.85
SMSP52788 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMSP52788 AC137767.1-201ENST00000602918 1920 ntBASIC20.39■□□□□ 0.85
SMSP52788 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMSP52788 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SMSP52788 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 AC011298.3-201ENST00000615796 283 ntBASIC20.38■□□□□ 0.85
SMSP52788 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.38■□□□□ 0.85
SMSP52788 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.38■□□□□ 0.85
SMSP52788 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMSP52788 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.37■□□□□ 0.85
SMSP52788 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMSP52788 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SMSP52788 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 SERBP1P1-201ENST00000396021 1160 ntBASIC20.37■□□□□ 0.85
SMSP52788 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.37■□□□□ 0.85
SMSP52788 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.37■□□□□ 0.85
SMSP52788 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMSP52788 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMSP52788 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.36■□□□□ 0.85
SMSP52788 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.36■□□□□ 0.85
SMSP52788 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.36■□□□□ 0.85
SMSP52788 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.36■□□□□ 0.85
SMSP52788 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.36■□□□□ 0.85
SMSP52788 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SMSP52788 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.36■□□□□ 0.85
SMSP52788 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMSP52788 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMSP52788 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms