Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YOL107WYOL107W 1029 nt4.61□□□□□ -1.67
TY1B-JR1P47098 RAD26YJR035W 3258 nt4.61□□□□□ -1.67
TY1B-JR1P47098 ROG1YGL144C 2058 nt4.61□□□□□ -1.67
TY1B-JR1P47098 YIL169CYIL169C 2988 nt4.61□□□□□ -1.67
TY1B-JR1P47098 BIO2YGR286C 1128 nt4.6□□□□□ -1.67
TY1B-JR1P47098 BMS1YPL217C 3552 nt4.6□□□□□ -1.67
TY1B-JR1P47098 PPZ1YML016C 2079 nt4.6□□□□□ -1.67
TY1B-JR1P47098 PAU23YLR037C 375 nt4.6□□□□□ -1.67
TY1B-JR1P47098 PNG1YPL096W 1092 nt4.6□□□□□ -1.67
TY1B-JR1P47098 NUP85YJR042W 2235 nt4.59□□□□□ -1.67
TY1B-JR1P47098 RDI1YDL135C 609 nt4.59□□□□□ -1.67
TY1B-JR1P47098 GUS1YGL245W 2127 nt4.59□□□□□ -1.67
TY1B-JR1P47098 YHR069C-AYHR069C-A 363 nt4.59□□□□□ -1.67
TY1B-JR1P47098 VTC4YJL012C 2166 nt4.59□□□□□ -1.67
TY1B-JR1P47098 PRP9YDL030W 1593 nt4.59□□□□□ -1.67
TY1B-JR1P47098 DAN4YJR151C 3486 nt4.59□□□□□ -1.68
TY1B-JR1P47098 YDR396WYDR396W 501 nt4.58□□□□□ -1.68
TY1B-JR1P47098 YPL276WYPL276W 438 nt4.58□□□□□ -1.68
TY1B-JR1P47098 DIB1YPR082C 432 nt4.58□□□□□ -1.68
TY1B-JR1P47098 GCN5YGR252W 1320 nt4.58□□□□□ -1.68
TY1B-JR1P47098 GUF1YLR289W 1938 nt4.58□□□□□ -1.68
TY1B-JR1P47098 NIS1YNL078W 1224 nt4.58□□□□□ -1.68
TY1B-JR1P47098 HEH2YDR458C 1992 nt4.57□□□□□ -1.68
TY1B-JR1P47098 YLR001CYLR001C 2589 nt4.57□□□□□ -1.68
TY1B-JR1P47098 ESF1YDR365C 1887 nt4.57□□□□□ -1.68
TY1B-JR1P47098 TAF1YGR274C 3201 nt4.57□□□□□ -1.68
TY1B-JR1P47098 ARO9YHR137W 1542 nt4.56□□□□□ -1.68
TY1B-JR1P47098 DDC1YPL194W 1839 nt4.56□□□□□ -1.68
TY1B-JR1P47098 YAL031W-AYAL031W-A 309 nt4.56□□□□□ -1.68
TY1B-JR1P47098 YPS6YIR039C 1614 nt4.56□□□□□ -1.68
TY1B-JR1P47098 YER134CYER134C 537 nt4.55□□□□□ -1.68
TY1B-JR1P47098 PEX18YHR160C 852 nt4.55□□□□□ -1.68
TY1B-JR1P47098 YML037CYML037C 1023 nt4.55□□□□□ -1.68
TY1B-JR1P47098 YPR136CYPR136C 513 nt4.55□□□□□ -1.68
TY1B-JR1P47098 YPK9YOR291W 4419 nt4.55□□□□□ -1.68
TY1B-JR1P47098 PDR3YBL005W 2931 nt4.55□□□□□ -1.68
TY1B-JR1P47098 XRN1YGL173C 4587 nt4.55□□□□□ -1.68
TY1B-JR1P47098 YDR526CYDR526C 471 nt4.55□□□□□ -1.68
TY1B-JR1P47098 YKL107WYKL107W 930 nt4.55□□□□□ -1.68
TY1B-JR1P47098 MSN1YOL116W 1149 nt4.55□□□□□ -1.68
TY1B-JR1P47098 SPT23YKL020C 3249 nt4.54□□□□□ -1.68
TY1B-JR1P47098 RPS21AYKR057W 264 nt4.54□□□□□ -1.68
TY1B-JR1P47098 ZDS1YMR273C 2748 nt4.54□□□□□ -1.68
TY1B-JR1P47098 CMR1YDL156W 1569 nt4.54□□□□□ -1.68
TY1B-JR1P47098 GRE1YPL223C 507 nt4.53□□□□□ -1.68
TY1B-JR1P47098 BLM10YFL007W 6432 nt4.53□□□□□ -1.68
TY1B-JR1P47098 SIR1YKR101W 1965 nt4.53□□□□□ -1.68
TY1B-JR1P47098 CCW14YLR390W-A 717 nt4.53□□□□□ -1.69
TY1B-JR1P47098 RDL2YOR286W 450 nt4.53□□□□□ -1.69
TY1B-JR1P47098 CBP3YPL215W 1008 nt4.53□□□□□ -1.69
TY1B-JR1P47098 PRX1YBL064C 786 nt4.52□□□□□ -1.69
TY1B-JR1P47098 ATP4YPL078C 735 nt4.52□□□□□ -1.69
TY1B-JR1P47098 CHA4YLR098C 1947 nt4.52□□□□□ -1.69
TY1B-JR1P47098 RPS11AYDR025W 471 nt4.51□□□□□ -1.69
TY1B-JR1P47098 ERP6YGL002W 651 nt4.51□□□□□ -1.69
TY1B-JR1P47098 YIL175WYIL175W 318 nt4.51□□□□□ -1.69
TY1B-JR1P47098 YJL222W-BYJL222W-B 138 nt4.51□□□□□ -1.69
TY1B-JR1P47098 PEX32YBR168W 1242 nt4.51□□□□□ -1.69
TY1B-JR1P47098 snR43snR43 209 nt4.51□□□□□ -1.69
TY1B-JR1P47098 YPL109CYPL109C 1974 nt4.51□□□□□ -1.69
TY1B-JR1P47098 ILS1YBL076C 3219 nt4.51□□□□□ -1.69
TY1B-JR1P47098 CDC14YFR028C 1656 nt4.51□□□□□ -1.69
TY1B-JR1P47098 RGC1YPR115W 3252 nt4.5□□□□□ -1.69
TY1B-JR1P47098 YOR022CYOR022C 2148 nt4.5□□□□□ -1.69
TY1B-JR1P47098 LCL2YLR104W 396 nt4.5□□□□□ -1.69
TY1B-JR1P47098 TUM1YOR251C 915 nt4.5□□□□□ -1.69
TY1B-JR1P47098 SMC6YLR383W 3345 nt4.5□□□□□ -1.69
TY1B-JR1P47098 SPT6YGR116W 4356 nt4.49□□□□□ -1.69
TY1B-JR1P47098 VEL1YGL258W 621 nt4.49□□□□□ -1.69
TY1B-JR1P47098 RNR2YJL026W 1200 nt4.49□□□□□ -1.69
TY1B-JR1P47098 YLR297WYLR297W 390 nt4.49□□□□□ -1.69
TY1B-JR1P47098 PRS5YOL061W 1491 nt4.49□□□□□ -1.69
TY1B-JR1P47098 GPI18YBR004C 1302 nt4.49□□□□□ -1.69
TY1B-JR1P47098 TMA108YIL137C 2841 nt4.48□□□□□ -1.69
TY1B-JR1P47098 GUP1YGL084C 1683 nt4.48□□□□□ -1.69
TY1B-JR1P47098 FKH1YIL131C 1455 nt4.48□□□□□ -1.69
TY1B-JR1P47098 MMR1YLR190W 1476 nt4.48□□□□□ -1.69
TY1B-JR1P47098 SRP40YKR092C 1221 nt4.48□□□□□ -1.69
TY1B-JR1P47098 TOM7YNL070W 183 nt4.48□□□□□ -1.69
TY1B-JR1P47098 YPL150WYPL150W 2706 nt4.48□□□□□ -1.69
TY1B-JR1P47098 ABD1YBR236C 1311 nt4.48□□□□□ -1.69
TY1B-JR1P47098 GFA1YKL104C 2154 nt4.48□□□□□ -1.69
TY1B-JR1P47098 CWH41YGL027C 2502 nt4.48□□□□□ -1.69
TY1B-JR1P47098 RSM24YDR175C 960 nt4.48□□□□□ -1.69
TY1B-JR1P47098 YGR016WYGR016W 573 nt4.48□□□□□ -1.69
TY1B-JR1P47098 YHR052W-AYHR052W-A 195 nt4.48□□□□□ -1.69
TY1B-JR1P47098 YHR054W-AYHR054W-A 195 nt4.48□□□□□ -1.69
TY1B-JR1P47098 CSM3YMR048W 954 nt4.48□□□□□ -1.69
TY1B-JR1P47098 ATG2YNL242W 4779 nt4.47□□□□□ -1.69
TY1B-JR1P47098 SOH1YGL127C 384 nt4.47□□□□□ -1.69
TY1B-JR1P47098 PAM18YLR008C 507 nt4.47□□□□□ -1.69
TY1B-JR1P47098 TRE1YPL176C 2352 nt4.47□□□□□ -1.69
TY1B-JR1P47098 MDM34YGL219C 1380 nt4.46□□□□□ -1.7
TY1B-JR1P47098 AFT1YGL071W 2073 nt4.46□□□□□ -1.7
TY1B-JR1P47098 BCP1YDR361C 852 nt4.46□□□□□ -1.7
TY1B-JR1P47098 YDL180WYDL180W 1644 nt4.46□□□□□ -1.7
TY1B-JR1P47098 YOR283WYOR283W 693 nt4.45□□□□□ -1.7
TY1B-JR1P47098 PMS1YNL082W 2622 nt4.45□□□□□ -1.7
TY1B-JR1P47098 VAC7YNL054W 3498 nt4.45□□□□□ -1.7
TY1B-JR1P47098 WTM2YOR229W 1404 nt4.45□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms