Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSKP43235 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.81■■□□□ 1.08
CTSKP43235 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTSKP43235 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTSKP43235 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTSKP43235 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.8■■□□□ 1.08
CTSKP43235 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
CTSKP43235 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTSKP43235 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CTSKP43235 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CTSKP43235 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.79■■□□□ 1.08
CTSKP43235 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.79■■□□□ 1.08
CTSKP43235 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.79■■□□□ 1.08
CTSKP43235 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSKP43235 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CTSKP43235 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSKP43235 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.78■■□□□ 1.08
CTSKP43235 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CTSKP43235 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.78■■□□□ 1.08
CTSKP43235 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CTSKP43235 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSKP43235 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSKP43235 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSKP43235 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.77■■□□□ 1.08
CTSKP43235 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.77■■□□□ 1.08
CTSKP43235 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.77■■□□□ 1.08
CTSKP43235 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.77■■□□□ 1.08
CTSKP43235 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.77■■□□□ 1.08
CTSKP43235 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
CTSKP43235 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.77■■□□□ 1.08
CTSKP43235 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSKP43235 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CTSKP43235 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.76■■□□□ 1.07
CTSKP43235 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSKP43235 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CTSKP43235 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSKP43235 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CTSKP43235 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSKP43235 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.76■■□□□ 1.07
CTSKP43235 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.76■■□□□ 1.07
CTSKP43235 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CTSKP43235 KRT18P61-201ENST00000585825 1298 ntBASIC21.76■■□□□ 1.07
CTSKP43235 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.76■■□□□ 1.07
CTSKP43235 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CTSKP43235 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.76■■□□□ 1.07
CTSKP43235 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSKP43235 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSKP43235 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSKP43235 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.75■■□□□ 1.07
CTSKP43235 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.75■■□□□ 1.07
CTSKP43235 TPRG1LP1-201ENST00000598702 760 ntBASIC21.75■■□□□ 1.07
CTSKP43235 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSKP43235 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSKP43235 AC068473.5-201ENST00000616428 2072 ntBASIC21.75■■□□□ 1.07
CTSKP43235 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSKP43235 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTSKP43235 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.74■■□□□ 1.07
CTSKP43235 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.74■■□□□ 1.07
CTSKP43235 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.74■■□□□ 1.07
CTSKP43235 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTSKP43235 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.74■■□□□ 1.07
CTSKP43235 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.74■■□□□ 1.07
CTSKP43235 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSKP43235 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CTSKP43235 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CTSKP43235 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSKP43235 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CTSKP43235 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSKP43235 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms