Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	GCD7	YLR291C	1146 nt		4.59	□□□□□ -1.67
SKP2	P42843	EAF7	YNL136W	1278 nt		4.59	□□□□□ -1.67
SKP2	P42843	MTR10	YOR160W	2919 nt		4.59	□□□□□ -1.67
SKP2	P42843	SLM4	YBR077C	489 nt		4.59	□□□□□ -1.67
SKP2	P42843	ZPR1	YGR211W	1461 nt		4.58	□□□□□ -1.68
SKP2	P42843	YIL025C	YIL025C	375 nt		4.58	□□□□□ -1.68
SKP2	P42843	SEC28	YIL076W	891 nt		4.58	□□□□□ -1.68
SKP2	P42843	YAL047W-A	YAL047W-A	330 nt		4.58	□□□□□ -1.68
SKP2	P42843	NSE1	YLR007W	1011 nt		4.58	□□□□□ -1.68
SKP2	P42843	YBL059W	YBL059W	582 nt		4.58	□□□□□ -1.68
SKP2	P42843	SLX1	YBR228W	915 nt		4.58	□□□□□ -1.68
SKP2	P42843	SKG3	YLR187W	3081 nt		4.57	□□□□□ -1.68
SKP2	P42843	DBP5	YOR046C	1449 nt		4.57	□□□□□ -1.68
SKP2	P42843	ENT1	YDL161W	1365 nt		4.57	□□□□□ -1.68
SKP2	P42843	TRM11	YOL124C	1302 nt		4.57	□□□□□ -1.68
SKP2	P42843	YCR050C	YCR050C	309 nt		4.57	□□□□□ -1.68
SKP2	P42843	BET1	YIL004C	429 nt		4.57	□□□□□ -1.68
SKP2	P42843	YAL064W	YAL064W	285 nt		4.57	□□□□□ -1.68
SKP2	P42843	IZH4	YOL101C	939 nt		4.57	□□□□□ -1.68
SKP2	P42843	TAF12	YDR145W	1620 nt		4.57	□□□□□ -1.68
SKP2	P42843	NAM2	YLR382C	2685 nt		4.57	□□□□□ -1.68
SKP2	P42843	BOI2	YER114C	3123 nt		4.57	□□□□□ -1.68
SKP2	P42843	AIP1	YMR092C	1848 nt		4.56	□□□□□ -1.68
SKP2	P42843	IMA3	YIL172C	1770 nt		4.56	□□□□□ -1.68
SKP2	P42843	IMA4	YJL221C	1770 nt		4.56	□□□□□ -1.68
SKP2	P42843	SRS2	YJL092W	3525 nt		4.56	□□□□□ -1.68
SKP2	P42843	HNT2	YDR305C	654 nt		4.56	□□□□□ -1.68
SKP2	P42843	HIM1	YDR317W	1245 nt		4.56	□□□□□ -1.68
SKP2	P42843	GEP7	YGL057C	864 nt		4.56	□□□□□ -1.68
SKP2	P42843	EFB1	YAL003W	621 nt		4.56	□□□□□ -1.68
SKP2	P42843	YLR163W-A	YLR163W-A	114 nt		4.56	□□□□□ -1.68
SKP2	P42843	APA1	YCL050C	966 nt		4.56	□□□□□ -1.68
SKP2	P42843	SPC105	YGL093W	2754 nt		4.56	□□□□□ -1.68
SKP2	P42843	GSM1	YJL103C	1857 nt		4.56	□□□□□ -1.68
SKP2	P42843	MSA1	YOR066W	1890 nt		4.56	□□□□□ -1.68
SKP2	P42843	ALR2	YFL050C	2577 nt		4.56	□□□□□ -1.68
SKP2	P42843	SAT4	YCR008W	1812 nt		4.56	□□□□□ -1.68
SKP2	P42843	RDH54	YBR073W	2877 nt		4.55	□□□□□ -1.68
SKP2	P42843	GLC3	YEL011W	2115 nt		4.55	□□□□□ -1.68
SKP2	P42843	YPR1	YDR368W	939 nt		4.55	□□□□□ -1.68
SKP2	P42843	DCV1	YFR012W	609 nt		4.55	□□□□□ -1.68
SKP2	P42843	RMR1	YGL250W	726 nt		4.55	□□□□□ -1.68
SKP2	P42843	SRB5	YGR104C	924 nt		4.55	□□□□□ -1.68
SKP2	P42843	YGR283C	YGR283C	1026 nt		4.55	□□□□□ -1.68
SKP2	P42843	YIL102C-A	YIL102C-A	228 nt		4.55	□□□□□ -1.68
SKP2	P42843	YML094C-A	YML094C-A	402 nt		4.55	□□□□□ -1.68
SKP2	P42843	MCM1	YMR043W	861 nt		4.55	□□□□□ -1.68
SKP2	P42843	PEX27	YOR193W	1131 nt		4.55	□□□□□ -1.68
SKP2	P42843	DSS4	YPR017C	432 nt		4.55	□□□□□ -1.68
SKP2	P42843	YDR261C-D	YDR261C-D	4815 nt		4.54	□□□□□ -1.68
SKP2	P42843	BMH1	YER177W	804 nt		4.54	□□□□□ -1.68
SKP2	P42843	RNA15	YGL044C	891 nt		4.54	□□□□□ -1.68
SKP2	P42843	PML39	YML107C	1005 nt		4.54	□□□□□ -1.68
SKP2	P42843	PRX1	YBL064C	786 nt		4.54	□□□□□ -1.68
SKP2	P42843	PNO1	YOR145C	825 nt		4.54	□□□□□ -1.68
SKP2	P42843	ECM8	YBR076W	1065 nt		4.54	□□□□□ -1.68
SKP2	P42843	ARX1	YDR101C	1782 nt		4.54	□□□□□ -1.68
SKP2	P42843	PTR3	YFR029W	2037 nt		4.54	□□□□□ -1.68
SKP2	P42843	SMF1	YOL122C	1728 nt		4.54	□□□□□ -1.68
SKP2	P42843	POL31	YJR006W	1464 nt		4.54	□□□□□ -1.68
SKP2	P42843	NAM9	YNL137C	1461 nt		4.54	□□□□□ -1.68
SKP2	P42843	OPT2	YPR194C	2634 nt		4.54	□□□□□ -1.68
SKP2	P42843	RSC58	YLR033W	1509 nt		4.53	□□□□□ -1.68
SKP2	P42843	YCL068C	YCL068C	783 nt		4.53	□□□□□ -1.68
SKP2	P42843	YCL076W	YCL076W	744 nt		4.53	□□□□□ -1.68
SKP2	P42843	YDL158C	YDL158C	309 nt		4.53	□□□□□ -1.68
SKP2	P42843	PLP1	YDR183W	693 nt		4.53	□□□□□ -1.68
SKP2	P42843	YLR366W	YLR366W	306 nt		4.53	□□□□□ -1.68
SKP2	P42843	YLR407W	YLR407W	687 nt		4.53	□□□□□ -1.68
SKP2	P42843	MRPS17	YMR188C	714 nt		4.53	□□□□□ -1.68
SKP2	P42843	YOR314W	YOR314W	330 nt		4.53	□□□□□ -1.68
SKP2	P42843	NCE102	YPR149W	522 nt		4.53	□□□□□ -1.68
SKP2	P42843	YPR174C	YPR174C	666 nt		4.53	□□□□□ -1.68
SKP2	P42843	SER3	YER081W	1410 nt		4.53	□□□□□ -1.68
SKP2	P42843	IMD2	YHR216W	1572 nt		4.53	□□□□□ -1.69
SKP2	P42843	MNN1	YER001W	2289 nt		4.52	□□□□□ -1.69
SKP2	P42843	RKM3	YBR030W	1659 nt		4.52	□□□□□ -1.69
SKP2	P42843	YDR545C-A	YDR545C-A	480 nt		4.52	□□□□□ -1.69
SKP2	P42843	YEL077W-A	YEL077W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YER190C-B	YER190C-B	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YFL068W	YFL068W	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YGR296C-B	YGR296C-B	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YHL050W-A	YHL050W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YHR219C-A	YHR219C-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	SDS3	YIL084C	984 nt		4.52	□□□□□ -1.69
SKP2	P42843	YIL177W-A	YIL177W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YJL225W-A	YJL225W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YLL066W-A	YLL066W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YLL067W-A	YLL067W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	GSP1	YLR293C	660 nt		4.52	□□□□□ -1.69
SKP2	P42843	YLR466C-A	YLR466C-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YLR467C-A	YLR467C-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YML133W-B	YML133W-B	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YNL339W-B	YNL339W-B	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YBL113W-A	YBL113W-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YBR013C	YBR013C	390 nt		4.52	□□□□□ -1.69
SKP2	P42843	YOR396C-A	YOR396C-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YPL283W-B	YPL283W-B	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	YPR204C-A	YPR204C-A	483 nt		4.52	□□□□□ -1.69
SKP2	P42843	IZH3	YLR023C	1632 nt		4.52	□□□□□ -1.69

Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms