Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KRT20P35900 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT20P35900 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT20P35900 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
KRT20P35900 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KRT20P35900 AL024507.2-201ENST00000606070 2574 ntBASIC20.71■□□□□ 0.91
KRT20P35900 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT20P35900 SRD5A1P1-201ENST00000442297 786 ntBASIC20.71■□□□□ 0.91
KRT20P35900 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT20P35900 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT20P35900 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT20P35900 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT20P35900 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT20P35900 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT20P35900 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT20P35900 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT20P35900 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
KRT20P35900 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
KRT20P35900 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT20P35900 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT20P35900 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT20P35900 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT20P35900 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.7■□□□□ 0.9
KRT20P35900 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT20P35900 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT20P35900 AC144652.1-201ENST00000609974 1624 ntBASIC20.7■□□□□ 0.9
KRT20P35900 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT20P35900 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT20P35900 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
KRT20P35900 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT20P35900 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT20P35900 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT20P35900 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT20P35900 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT20P35900 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT20P35900 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT20P35900 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT20P35900 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT20P35900 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT20P35900 AC079630.1-202ENST00000618127 1840 ntBASIC20.69■□□□□ 0.9
KRT20P35900 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT20P35900 C17orf82-201ENST00000623772 1530 ntBASIC20.68■□□□□ 0.9
KRT20P35900 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.68■□□□□ 0.9
KRT20P35900 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
KRT20P35900 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT20P35900 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT20P35900 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT20P35900 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT20P35900 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT20P35900 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT20P35900 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT20P35900 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT20P35900 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT20P35900 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT20P35900 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT20P35900 AC008406.3-201ENST00000620001 1374 ntBASIC20.67■□□□□ 0.9
KRT20P35900 FP325331.1-202ENST00000623531 1380 ntBASIC20.67■□□□□ 0.9
KRT20P35900 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT20P35900 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT20P35900 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT20P35900 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT20P35900 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KRT20P35900 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.66■□□□□ 0.9
KRT20P35900 AC131281.2-201ENST00000520478 145 ntBASIC20.66■□□□□ 0.9
KRT20P35900 AC092171.4-201ENST00000609130 632 ntBASIC20.66■□□□□ 0.9
KRT20P35900 AC241377.3-202ENST00000626088 1088 ntBASIC20.66■□□□□ 0.9
KRT20P35900 AC241585.3-202ENST00000628937 1088 ntBASIC20.66■□□□□ 0.9
KRT20P35900 AC245100.8-202ENST00000629247 1058 ntBASIC20.66■□□□□ 0.9
KRT20P35900 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT20P35900 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT20P35900 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT20P35900 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT20P35900 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT20P35900 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT20P35900 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT20P35900 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 LINC01529-204ENST00000636474 1715 ntBASIC20.65■□□□□ 0.9
KRT20P35900 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
KRT20P35900 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT20P35900 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.65■□□□□ 0.9
KRT20P35900 AL512631.2-201ENST00000604634 923 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms