Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC1P29353 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHC1P29353 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.02■□□□□ 0.8
SHC1P29353 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHC1P29353 AL136162.1-201ENST00000607711 1078 ntBASIC20.02■□□□□ 0.8
SHC1P29353 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC1P29353 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC1P29353 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
SHC1P29353 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHC1P29353 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SHC1P29353 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.01■□□□□ 0.79
SHC1P29353 AC024257.2-201ENST00000549699 147 ntBASIC20.01■□□□□ 0.79
SHC1P29353 AL499627.2-201ENST00000606283 725 ntBASIC20.01■□□□□ 0.79
SHC1P29353 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
SHC1P29353 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.01■□□□□ 0.79
SHC1P29353 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SHC1P29353 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.01■□□□□ 0.79
SHC1P29353 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHC1P29353 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20■□□□□ 0.79
SHC1P29353 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20■□□□□ 0.79
SHC1P29353 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20■□□□□ 0.79
SHC1P29353 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20■□□□□ 0.79
SHC1P29353 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 DUX4L19-201ENST00000557448 1267 ntBASIC20■□□□□ 0.79
SHC1P29353 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHC1P29353 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20■□□□□ 0.79
SHC1P29353 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHC1P29353 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 ECEL1P1-201ENST00000373592 1742 ntBASIC19.99■□□□□ 0.79
SHC1P29353 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.99■□□□□ 0.79
SHC1P29353 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 AC127496.7-201ENST00000625110 1798 ntBASIC19.99■□□□□ 0.79
SHC1P29353 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
SHC1P29353 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHC1P29353 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.99■□□□□ 0.79
SHC1P29353 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.99■□□□□ 0.79
SHC1P29353 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.98■□□□□ 0.79
SHC1P29353 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.98■□□□□ 0.79
SHC1P29353 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.98■□□□□ 0.79
SHC1P29353 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SHC1P29353 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.98■□□□□ 0.79
SHC1P29353 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.98■□□□□ 0.79
SHC1P29353 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.98■□□□□ 0.79
SHC1P29353 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHC1P29353 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SHC1P29353 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.97■□□□□ 0.79
SHC1P29353 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 AC133637.1-201ENST00000624115 1537 ntBASIC19.97■□□□□ 0.79
SHC1P29353 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.97■□□□□ 0.79
SHC1P29353 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.97■□□□□ 0.79
SHC1P29353 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.97■□□□□ 0.79
SHC1P29353 PBX2P1-201ENST00000493219 1291 ntBASIC19.97■□□□□ 0.79
SHC1P29353 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.97■□□□□ 0.79
SHC1P29353 AL139246.5-201ENST00000606645 996 ntBASIC19.97■□□□□ 0.79
SHC1P29353 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.97■□□□□ 0.79
SHC1P29353 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 AC135279.3-201ENST00000610945 1311 ntBASIC19.97■□□□□ 0.79
SHC1P29353 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHC1P29353 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.97■□□□□ 0.79
SHC1P29353 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 AC137767.1-201ENST00000602918 1920 ntBASIC19.96■□□□□ 0.79
SHC1P29353 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHC1P29353 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.96■□□□□ 0.79
SHC1P29353 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms