Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.87■□□□□ 0.77
GDF1P27539 AC010141.3-201ENST00000456659 717 ntBASIC19.87■□□□□ 0.77
GDF1P27539 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.87■□□□□ 0.77
GDF1P27539 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.87■□□□□ 0.77
GDF1P27539 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
GDF1P27539 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.87■□□□□ 0.77
GDF1P27539 AL031602.1-201ENST00000633169 911 ntBASIC19.87■□□□□ 0.77
GDF1P27539 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GDF1P27539 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.87■□□□□ 0.77
GDF1P27539 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.86■□□□□ 0.77
GDF1P27539 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GDF1P27539 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.86■□□□□ 0.77
GDF1P27539 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.86■□□□□ 0.77
GDF1P27539 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.86■□□□□ 0.77
GDF1P27539 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.86■□□□□ 0.77
GDF1P27539 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 AC087623.3-201ENST00000607047 1098 ntBASIC19.86■□□□□ 0.77
GDF1P27539 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.86■□□□□ 0.77
GDF1P27539 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.86■□□□□ 0.77
GDF1P27539 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF1P27539 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GDF1P27539 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GDF1P27539 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
GDF1P27539 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF1P27539 YBX1P1-201ENST00000445822 960 ntBASIC19.85■□□□□ 0.77
GDF1P27539 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.85■□□□□ 0.77
GDF1P27539 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF1P27539 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.85■□□□□ 0.77
GDF1P27539 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
GDF1P27539 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.85■□□□□ 0.77
GDF1P27539 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF1P27539 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GDF1P27539 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.85■□□□□ 0.77
GDF1P27539 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 AC027612.3-201ENST00000413684 1047 ntBASIC19.84■□□□□ 0.77
GDF1P27539 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.84■□□□□ 0.77
GDF1P27539 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF1P27539 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF1P27539 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.84■□□□□ 0.77
GDF1P27539 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.84■□□□□ 0.77
GDF1P27539 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
GDF1P27539 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.83■□□□□ 0.77
GDF1P27539 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GDF1P27539 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF1P27539 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GDF1P27539 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF1P27539 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDF1P27539 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDF1P27539 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDF1P27539 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF1P27539 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF1P27539 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GDF1P27539 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.82■□□□□ 0.76
GDF1P27539 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF1P27539 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF1P27539 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GDF1P27539 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF1P27539 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF1P27539 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF1P27539 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.82■□□□□ 0.76
GDF1P27539 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF1P27539 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF1P27539 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
GDF1P27539 LINC01960-201ENST00000563759 1884 ntBASIC19.82■□□□□ 0.76
GDF1P27539 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
GDF1P27539 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.81■□□□□ 0.76
GDF1P27539 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDF1P27539 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF1P27539 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.81■□□□□ 0.76
GDF1P27539 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms