Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF1P18846 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF1P18846 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF1P18846 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF1P18846 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.2■□□□□ 0.66
ATF1P18846 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF1P18846 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATF1P18846 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATF1P18846 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF1P18846 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF1P18846 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF1P18846 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF1P18846 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF1P18846 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATF1P18846 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF1P18846 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
ATF1P18846 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF1P18846 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATF1P18846 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATF1P18846 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF1P18846 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATF1P18846 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.19■□□□□ 0.66
ATF1P18846 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATF1P18846 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF1P18846 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF1P18846 AC144652.1-201ENST00000609974 1624 ntBASIC19.18■□□□□ 0.66
ATF1P18846 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATF1P18846 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATF1P18846 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.17■□□□□ 0.66
ATF1P18846 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.17■□□□□ 0.66
ATF1P18846 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.17■□□□□ 0.66
ATF1P18846 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATF1P18846 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.17■□□□□ 0.66
ATF1P18846 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATF1P18846 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATF1P18846 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.17■□□□□ 0.66
ATF1P18846 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
ATF1P18846 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.17■□□□□ 0.66
ATF1P18846 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.16■□□□□ 0.66
ATF1P18846 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATF1P18846 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 MIR6722-201ENST00000617286 78 ntBASIC19.16■□□□□ 0.66
ATF1P18846 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.16■□□□□ 0.66
ATF1P18846 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 AC005229.4-201ENST00000610085 2198 ntBASIC19.16■□□□□ 0.66
ATF1P18846 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATF1P18846 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.15■□□□□ 0.66
ATF1P18846 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ATF1P18846 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.15■□□□□ 0.66
ATF1P18846 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.15■□□□□ 0.66
ATF1P18846 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 AC005703.6-201ENST00000623265 1329 ntBASIC19.15■□□□□ 0.66
ATF1P18846 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATF1P18846 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ATF1P18846 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATF1P18846 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ATF1P18846 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ATF1P18846 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.14■□□□□ 0.65
ATF1P18846 AC021242.3-201ENST00000607598 1377 ntBASIC19.14■□□□□ 0.65
ATF1P18846 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATF1P18846 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATF1P18846 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATF1P18846 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ATF1P18846 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.14■□□□□ 0.65
ATF1P18846 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.13■□□□□ 0.65
ATF1P18846 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF1P18846 BX664725.1-201ENST00000438252 379 ntBASIC19.13■□□□□ 0.65
ATF1P18846 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF1P18846 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms