Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VCLP18206 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.94■■□□□ 1.1
VCLP18206 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VCLP18206 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VCLP18206 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.93■■□□□ 1.1
VCLP18206 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VCLP18206 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.93■■□□□ 1.1
VCLP18206 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
VCLP18206 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.93■■□□□ 1.1
VCLP18206 pRNA.6-201ENST00000610482 90 ntBASIC21.93■■□□□ 1.1
VCLP18206 pRNA.5-201ENST00000612139 90 ntBASIC21.93■■□□□ 1.1
VCLP18206 pRNA.11-201ENST00000618423 90 ntBASIC21.93■■□□□ 1.1
VCLP18206 pRNA.13-201ENST00000619112 90 ntBASIC21.93■■□□□ 1.1
VCLP18206 C1orf229-201ENST00000623686 2258 ntBASIC21.93■■□□□ 1.1
VCLP18206 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VCLP18206 AC137767.1-201ENST00000602918 1920 ntBASIC21.92■■□□□ 1.1
VCLP18206 MIR638-201ENST00000385237 100 ntBASIC21.92■■□□□ 1.1
VCLP18206 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.92■■□□□ 1.1
VCLP18206 MIR3181-201ENST00000578512 73 ntBASIC21.92■■□□□ 1.1
VCLP18206 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
VCLP18206 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VCLP18206 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.92■■□□□ 1.1
VCLP18206 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
VCLP18206 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.91■■□□□ 1.1
VCLP18206 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.91■■□□□ 1.1
VCLP18206 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.91■■□□□ 1.1
VCLP18206 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VCLP18206 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
VCLP18206 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.9■■□□□ 1.1
VCLP18206 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
VCLP18206 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VCLP18206 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 EDA-201ENST00000338901 1233 ntBASIC21.9■■□□□ 1.1
VCLP18206 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 AC136469.2-201ENST00000623944 1028 ntBASIC21.9■■□□□ 1.1
VCLP18206 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.9■■□□□ 1.1
VCLP18206 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCLP18206 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.9■■□□□ 1.1
VCLP18206 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.89■■□□□ 1.1
VCLP18206 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VCLP18206 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VCLP18206 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
VCLP18206 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.89■■□□□ 1.1
VCLP18206 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
VCLP18206 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCLP18206 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.89■■□□□ 1.09
VCLP18206 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.89■■□□□ 1.09
VCLP18206 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.89■■□□□ 1.09
VCLP18206 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
VCLP18206 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCLP18206 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCLP18206 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
VCLP18206 AL353803.4-201ENST00000565882 1934 ntBASIC21.88■■□□□ 1.09
VCLP18206 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.88■■□□□ 1.09
VCLP18206 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCLP18206 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCLP18206 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCLP18206 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.88■■□□□ 1.09
VCLP18206 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.88■■□□□ 1.09
VCLP18206 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.88■■□□□ 1.09
VCLP18206 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
VCLP18206 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.88■■□□□ 1.09
VCLP18206 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.88■■□□□ 1.09
VCLP18206 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCLP18206 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCLP18206 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.88■■□□□ 1.09
VCLP18206 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCLP18206 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.87■■□□□ 1.09
VCLP18206 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCLP18206 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCLP18206 MIR4767-201ENST00000582827 78 ntBASIC21.87■■□□□ 1.09
VCLP18206 AL499627.2-201ENST00000606283 725 ntBASIC21.87■■□□□ 1.09
VCLP18206 AC005837.3-201ENST00000612163 286 ntBASIC21.87■■□□□ 1.09
VCLP18206 AL355001.2-201ENST00000620617 1191 ntBASIC21.87■■□□□ 1.09
VCLP18206 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCLP18206 LINC00526-201ENST00000581067 1875 ntBASIC21.87■■□□□ 1.09
VCLP18206 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCLP18206 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.87■■□□□ 1.09
VCLP18206 AC007375.3-201ENST00000600936 2314 ntBASIC21.86■■□□□ 1.09
VCLP18206 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCLP18206 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCLP18206 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCLP18206 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
VCLP18206 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCLP18206 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
VCLP18206 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCLP18206 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.86■■□□□ 1.09
VCLP18206 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCLP18206 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms