Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEFA4P12838 MIR6722-201ENST00000617286 78 ntBASIC17.72■□□□□ 0.43
DEFA4P12838 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DEFA4P12838 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.72■□□□□ 0.43
DEFA4P12838 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEFA4P12838 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEFA4P12838 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
DEFA4P12838 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DEFA4P12838 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.71■□□□□ 0.43
DEFA4P12838 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.71■□□□□ 0.43
DEFA4P12838 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.71■□□□□ 0.43
DEFA4P12838 AC239859.2-201ENST00000444165 318 ntBASIC17.71■□□□□ 0.43
DEFA4P12838 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 MTDHP2-201ENST00000601468 714 ntBASIC17.71■□□□□ 0.43
DEFA4P12838 MIR4787-201ENST00000607364 84 ntBASIC17.71■□□□□ 0.43
DEFA4P12838 AC092028.1-203ENST00000608262 953 ntBASIC17.71■□□□□ 0.43
DEFA4P12838 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEFA4P12838 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DEFA4P12838 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.7■□□□□ 0.42
DEFA4P12838 AC079630.1-202ENST00000618127 1840 ntBASIC17.7■□□□□ 0.42
DEFA4P12838 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DEFA4P12838 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.7■□□□□ 0.42
DEFA4P12838 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.7■□□□□ 0.42
DEFA4P12838 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.7■□□□□ 0.42
DEFA4P12838 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DEFA4P12838 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DEFA4P12838 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DEFA4P12838 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.69■□□□□ 0.42
DEFA4P12838 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.69■□□□□ 0.42
DEFA4P12838 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.69■□□□□ 0.42
DEFA4P12838 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DEFA4P12838 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.69■□□□□ 0.42
DEFA4P12838 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DEFA4P12838 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DEFA4P12838 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.68■□□□□ 0.42
DEFA4P12838 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DEFA4P12838 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DEFA4P12838 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
DEFA4P12838 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DEFA4P12838 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DEFA4P12838 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DEFA4P12838 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DEFA4P12838 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
DEFA4P12838 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.68■□□□□ 0.42
DEFA4P12838 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
DEFA4P12838 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
DEFA4P12838 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 TSPY9P-201ENST00000440215 945 ntBASIC17.67■□□□□ 0.42
DEFA4P12838 TSPY11P-201ENST00000442607 1045 ntBASIC17.67■□□□□ 0.42
DEFA4P12838 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.67■□□□□ 0.42
DEFA4P12838 AC009299.2-201ENST00000482477 511 ntBASIC17.67■□□□□ 0.42
DEFA4P12838 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.67■□□□□ 0.42
DEFA4P12838 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DEFA4P12838 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.67■□□□□ 0.42
DEFA4P12838 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DEFA4P12838 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DEFA4P12838 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DEFA4P12838 AC242852.2-201ENST00000615738 1807 ntBASIC17.66■□□□□ 0.42
DEFA4P12838 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DEFA4P12838 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DEFA4P12838 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
DEFA4P12838 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.66■□□□□ 0.42
DEFA4P12838 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.66■□□□□ 0.42
DEFA4P12838 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms