Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF728P0DKX0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF728P0DKX0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF728P0DKX0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 MIR3621-201ENST00000580529 85 ntBASIC18.57■□□□□ 0.56
ZNF728P0DKX0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 AL117332.1-201ENST00000622628 974 ntBASIC18.57■□□□□ 0.56
ZNF728P0DKX0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF728P0DKX0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 AC092053.2-201ENST00000640557 1818 ntBASIC18.56■□□□□ 0.56
ZNF728P0DKX0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF728P0DKX0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF728P0DKX0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 C11orf96-202ENST00000528572 1834 ntBASIC18.54■□□□□ 0.56
ZNF728P0DKX0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF728P0DKX0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 AC009102.2-201ENST00000606772 1639 ntBASIC18.53■□□□□ 0.56
ZNF728P0DKX0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF728P0DKX0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms