Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 PSY4YBL046W 1326 nt6.41□□□□□ -1.38
TY1A-LR1P0CX68 SAS10YDL153C 1833 nt6.41□□□□□ -1.38
TY1A-LR1P0CX68 FAR8YMR029C 1572 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 YDR396WYDR396W 501 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 HRA1HRA1 564 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 MRP17YKL003C 396 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 RPL17AYKL180W 555 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 YLR111WYLR111W 333 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 YMR135W-AYMR135W-A 534 nt6.4□□□□□ -1.38
TY1A-LR1P0CX68 PPN1YDR452W 2025 nt6.4□□□□□ -1.39
TY1A-LR1P0CX68 DLD1YDL174C 1764 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 SIT1YEL065W 1887 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 SRD1YCR018C 666 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 DST1YGL043W 930 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 YGL260WYGL260W 231 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 PRP45YAL032C 1140 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 DCS1YLR270W 1053 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 RIO2YNL207W 1278 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 ASA1YPR085C 1332 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 NUP1YOR098C 3231 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 DUG1YFR044C 1446 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 YMR155WYMR155W 1644 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 SAT4YCR008W 1812 nt6.39□□□□□ -1.39
TY1A-LR1P0CX68 YCL076WYCL076W 744 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 CDC43YGL155W 1131 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 YHL002C-AYHL002C-A 489 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 CFD1YIL003W 882 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 YKL151CYKL151C 1014 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 ZRT2YLR130C 1269 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 YMR310CYMR310C 954 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 MDG1YNL173C 1101 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 YNL198CYNL198C 303 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 YNR014WYNR014W 639 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 CIN5YOR028C 888 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 RPA43YOR340C 981 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 MSL5YLR116W 1431 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 POL31YJR006W 1464 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 SST2YLR452C 2097 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 PRT1YOR361C 2292 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 ATG1YGL180W 2694 nt6.38□□□□□ -1.39
TY1A-LR1P0CX68 KNS1YLL019C 2214 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 AFR1YDR085C 1863 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 RAD28YDR030C 1521 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 UBC8YEL012W 657 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 YFR034W-AYFR034W-A 288 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 TIF11YMR260C 462 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 TPK2YPL203W 1143 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 YLL066CYLL066C 3618 nt6.37□□□□□ -1.39
TY1A-LR1P0CX68 XKS1YGR194C 1803 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 YDR387CYDR387C 1668 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 ADH7YCR105W 1086 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 FMN1YDR236C 657 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 RPL12AYEL054C 498 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 YER135CYER135C 393 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 HEM2YGL040C 1029 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 BUD13YGL174W 801 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 LAG1YHL003C 1236 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 YAL019W-AYAL019W-A 570 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 YKR032WYKR032W 315 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 YLR126CYLR126C 756 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 COQ5YML110C 924 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 PDC6YGR087C 1692 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 AVO1YOL078W 3531 nt6.36□□□□□ -1.39
TY1A-LR1P0CX68 AEP1YMR064W 1557 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 GSH1YJL101C 2037 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 GPD2YOL059W 1323 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 YGR121W-AYGR121W-A 216 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 YGR137WYGR137W 375 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 PDX1YGR193C 1233 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 CDC12YHR107C 1224 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 RPL2BYIL018W 765 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 YAR029WYAR029W 225 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 RNH203YLR154C 333 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 YMR320WYMR320W 306 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 HBN1YCL026C-B 582 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 ADF1YCL058W-A 342 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 GLN3YER040W 2193 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 EKI1YDR147W 1605 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 YIL067CYIL067C 2037 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 IFM1YOL023W 2031 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 VMA2YBR127C 1554 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 SDS24YBR214W 1584 nt6.35□□□□□ -1.39
TY1A-LR1P0CX68 CIR2YOR356W 1896 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 RSM7YJR113C 744 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 BLI1YKL061W 342 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 OCA2YNL056W 594 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 SWS2YNL081C 432 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 YNL089CYNL089C 477 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 MET22YOL064C 1074 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 MHF1YOL086W-A 273 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 HRP1YOL123W 1605 nt6.34□□□□□ -1.39
TY1A-LR1P0CX68 YKR078WYKR078W 1758 nt6.34□□□□□ -1.4
TY1A-LR1P0CX68 BDP1YNL039W 1785 nt6.34□□□□□ -1.4
TY1A-LR1P0CX68 EMP65YER140W 1671 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 HEL1YKR017C 1656 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 YDL187CYDL187C 330 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 DPP1YDR284C 870 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 RGI1YER067W 486 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 YHR007C-AYHR007C-A 216 nt6.33□□□□□ -1.4
TY1A-LR1P0CX68 YKL147CYKL147C 618 nt6.33□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms