Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 STE23YLR389C 3084 nt3.28□□□□□ -1.88
RPL40BP0CH09 ARO9YHR137W 1542 nt3.28□□□□□ -1.88
RPL40BP0CH09 SOF1YLL011W 1470 nt3.28□□□□□ -1.88
RPL40BP0CH09 RIM4YHL024W 2142 nt3.28□□□□□ -1.89
RPL40BP0CH09 SPA2YLL021W 4401 nt3.27□□□□□ -1.89
RPL40BP0CH09 VEL1YGL258W 621 nt3.27□□□□□ -1.89
RPL40BP0CH09 YHR095WYHR095W 495 nt3.27□□□□□ -1.89
RPL40BP0CH09 YHR202WYHR202W 1809 nt3.27□□□□□ -1.89
RPL40BP0CH09 CAF120YNL278W 3183 nt3.26□□□□□ -1.89
RPL40BP0CH09 YCL075WYCL075W 441 nt3.26□□□□□ -1.89
RPL40BP0CH09 BMH2YDR099W 822 nt3.26□□□□□ -1.89
RPL40BP0CH09 TOM40YMR203W 1164 nt3.26□□□□□ -1.89
RPL40BP0CH09 PBP2YBR233W 1242 nt3.26□□□□□ -1.89
RPL40BP0CH09 DAN4YJR151C 3486 nt3.26□□□□□ -1.89
RPL40BP0CH09 DBP10YDL031W 2988 nt3.26□□□□□ -1.89
RPL40BP0CH09 PRM7YDL039C 2097 nt3.26□□□□□ -1.89
RPL40BP0CH09 GYP6YJL044C 1377 nt3.25□□□□□ -1.89
RPL40BP0CH09 GEM1YAL048C 1989 nt3.25□□□□□ -1.89
RPL40BP0CH09 YGR107WYGR107W 450 nt3.25□□□□□ -1.89
RPL40BP0CH09 CAP2YIL034C 864 nt3.25□□□□□ -1.89
RPL40BP0CH09 YJR128WYJR128W 360 nt3.25□□□□□ -1.89
RPL40BP0CH09 YLR125WYLR125W 411 nt3.25□□□□□ -1.89
RPL40BP0CH09 RPA43YOR340C 981 nt3.25□□□□□ -1.89
RPL40BP0CH09 NCE102YPR149W 522 nt3.25□□□□□ -1.89
RPL40BP0CH09 REV3YPL167C 4515 nt3.25□□□□□ -1.89
RPL40BP0CH09 CDC45YLR103C 1953 nt3.25□□□□□ -1.89
RPL40BP0CH09 KRI1YNL308C 1776 nt3.25□□□□□ -1.89
RPL40BP0CH09 PAM1YDR251W 2493 nt3.25□□□□□ -1.89
RPL40BP0CH09 STE12YHR084W 2067 nt3.24□□□□□ -1.89
RPL40BP0CH09 RSC1YGR056W 2787 nt3.24□□□□□ -1.89
RPL40BP0CH09 ASI1YMR119W 1875 nt3.24□□□□□ -1.89
RPL40BP0CH09 ATG21YPL100W 1491 nt3.24□□□□□ -1.89
RPL40BP0CH09 ORM1YGR038W 669 nt3.24□□□□□ -1.89
RPL40BP0CH09 SPT4YGR063C 309 nt3.24□□□□□ -1.89
RPL40BP0CH09 COS8YHL048W 1146 nt3.24□□□□□ -1.89
RPL40BP0CH09 ANB1YJR047C 474 nt3.24□□□□□ -1.89
RPL40BP0CH09 COX14YML129C 213 nt3.24□□□□□ -1.89
RPL40BP0CH09 ATG3YNR007C 933 nt3.24□□□□□ -1.89
RPL40BP0CH09 snR42snR42 351 nt3.24□□□□□ -1.89
RPL40BP0CH09 YHR177WYHR177W 1362 nt3.24□□□□□ -1.89
RPL40BP0CH09 VTC4YJL012C 2166 nt3.24□□□□□ -1.89
RPL40BP0CH09 SWI1YPL016W 3945 nt3.24□□□□□ -1.89
RPL40BP0CH09 ALA1YOR335C 2877 nt3.23□□□□□ -1.89
RPL40BP0CH09 YHL026CYHL026C 948 nt3.23□□□□□ -1.89
RPL40BP0CH09 BCD1YHR040W 1101 nt3.23□□□□□ -1.89
RPL40BP0CH09 SRP40YKR092C 1221 nt3.23□□□□□ -1.89
RPL40BP0CH09 PFA4YOL003C 1137 nt3.23□□□□□ -1.89
RPL40BP0CH09 YML020WYML020W 1995 nt3.23□□□□□ -1.89
RPL40BP0CH09 SKM1YOL113W 1968 nt3.23□□□□□ -1.89
RPL40BP0CH09 TDA11YHR159W 1515 nt3.23□□□□□ -1.89
RPL40BP0CH09 YLR352WYLR352W 2424 nt3.22□□□□□ -1.89
RPL40BP0CH09 TAF1YGR274C 3201 nt3.22□□□□□ -1.89
RPL40BP0CH09 SRB5YGR104C 924 nt3.22□□□□□ -1.89
RPL40BP0CH09 PRE8YML092C 753 nt3.22□□□□□ -1.89
RPL40BP0CH09 ADD37YMR184W 597 nt3.22□□□□□ -1.89
RPL40BP0CH09 HCM1YCR065W 1695 nt3.21□□□□□ -1.9
RPL40BP0CH09 GAS4YOL132W 1416 nt3.21□□□□□ -1.9
RPL40BP0CH09 BMH1YER177W 804 nt3.21□□□□□ -1.9
RPL40BP0CH09 YGR051CYGR051C 324 nt3.21□□□□□ -1.9
RPL40BP0CH09 tV(CAC)DtV(CAC)D 73 nt3.21□□□□□ -1.9
RPL40BP0CH09 tV(CAC)HtV(CAC)H 73 nt3.21□□□□□ -1.9
RPL40BP0CH09 YIR017W-AYIR017W-A 600 nt3.21□□□□□ -1.9
RPL40BP0CH09 AUR1YKL004W 1206 nt3.21□□□□□ -1.9
RPL40BP0CH09 MED7YOL135C 669 nt3.21□□□□□ -1.9
RPL40BP0CH09 OSW1YOR255W 837 nt3.21□□□□□ -1.9
RPL40BP0CH09 ECM8YBR076W 1065 nt3.21□□□□□ -1.9
RPL40BP0CH09 ARG5,6YER069W 2592 nt3.2□□□□□ -1.9
RPL40BP0CH09 RSC3YDR303C 2658 nt3.2□□□□□ -1.9
RPL40BP0CH09 URA2YJL130C 6645 nt3.2□□□□□ -1.9
RPL40BP0CH09 TRX3YCR083W 384 nt3.2□□□□□ -1.9
RPL40BP0CH09 YDR464C-AYDR464C-A 189 nt3.2□□□□□ -1.9
RPL40BP0CH09 YPT7YML001W 627 nt3.2□□□□□ -1.9
RPL40BP0CH09 ROT1YMR200W 771 nt3.2□□□□□ -1.9
RPL40BP0CH09 ERG2YMR202W 669 nt3.2□□□□□ -1.9
RPL40BP0CH09 ATG8YBL078C 354 nt3.2□□□□□ -1.9
RPL40BP0CH09 LDS2YOL047C 1071 nt3.2□□□□□ -1.9
RPL40BP0CH09 YOR331CYOR331C 558 nt3.2□□□□□ -1.9
RPL40BP0CH09 YPL168WYPL168W 1293 nt3.2□□□□□ -1.9
RPL40BP0CH09 MEF2YJL102W 2460 nt3.2□□□□□ -1.9
RPL40BP0CH09 CLD1YGR110W 1338 nt3.19□□□□□ -1.9
RPL40BP0CH09 GIP4YAL031C 2283 nt3.19□□□□□ -1.9
RPL40BP0CH09 MTR4YJL050W 3222 nt3.19□□□□□ -1.9
RPL40BP0CH09 IKS1YJL057C 2004 nt3.19□□□□□ -1.9
RPL40BP0CH09 GUS1YGL245W 2127 nt3.19□□□□□ -1.9
RPL40BP0CH09 ADK2YER170W 678 nt3.19□□□□□ -1.9
RPL40BP0CH09 NVJ1YHR195W 966 nt3.19□□□□□ -1.9
RPL40BP0CH09 STV1YMR054W 2673 nt3.19□□□□□ -1.9
RPL40BP0CH09 POL3YDL102W 3294 nt3.19□□□□□ -1.9
RPL40BP0CH09 BUD27YFL023W 2391 nt3.18□□□□□ -1.9
RPL40BP0CH09 CBP1YJL209W 1965 nt3.18□□□□□ -1.9
RPL40BP0CH09 PRP40YKL012W 1752 nt3.18□□□□□ -1.9
RPL40BP0CH09 DOG2YHR043C 741 nt3.18□□□□□ -1.9
RPL40BP0CH09 YRA2YKL214C 612 nt3.18□□□□□ -1.9
RPL40BP0CH09 SED5YLR026C 1023 nt3.18□□□□□ -1.9
RPL40BP0CH09 SHH3YMR118C 591 nt3.18□□□□□ -1.9
RPL40BP0CH09 SME1YOR159C 285 nt3.18□□□□□ -1.9
RPL40BP0CH09 YPL039WYPL039W 951 nt3.18□□□□□ -1.9
RPL40BP0CH09 MSR1YHR091C 1932 nt3.18□□□□□ -1.9
RPL40BP0CH09 SSM4YIL030C 3960 nt3.18□□□□□ -1.9
RPL40BP0CH09 YPR022CYPR022C 3402 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms