Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR2I1P-207ENST00000453522 948 ntBASIC19.96■□□□□ 0.79
FREM3P0C091 IGHV3-19-201ENST00000521488 291 ntBASIC19.96■□□□□ 0.79
FREM3P0C091 AP005435.1-201ENST00000529293 1178 ntBASIC19.96■□□□□ 0.79
FREM3P0C091 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FREM3P0C091 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.95■□□□□ 0.78
FREM3P0C091 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FREM3P0C091 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
FREM3P0C091 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
FREM3P0C091 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.95■□□□□ 0.78
FREM3P0C091 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FREM3P0C091 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.95■□□□□ 0.78
FREM3P0C091 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FREM3P0C091 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.94■□□□□ 0.78
FREM3P0C091 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FREM3P0C091 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.94■□□□□ 0.78
FREM3P0C091 LINC01960-201ENST00000563759 1884 ntBASIC19.94■□□□□ 0.78
FREM3P0C091 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FREM3P0C091 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FREM3P0C091 AC097381.1-201ENST00000429019 1296 ntBASIC19.94■□□□□ 0.78
FREM3P0C091 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.94■□□□□ 0.78
FREM3P0C091 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.94■□□□□ 0.78
FREM3P0C091 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FREM3P0C091 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
FREM3P0C091 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.93■□□□□ 0.78
FREM3P0C091 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FREM3P0C091 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FREM3P0C091 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FREM3P0C091 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.93■□□□□ 0.78
FREM3P0C091 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
FREM3P0C091 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FREM3P0C091 AC087239.1-201ENST00000622671 572 ntBASIC19.93■□□□□ 0.78
FREM3P0C091 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.92■□□□□ 0.78
FREM3P0C091 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FREM3P0C091 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
FREM3P0C091 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.92■□□□□ 0.78
FREM3P0C091 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FREM3P0C091 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FREM3P0C091 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.92■□□□□ 0.78
FREM3P0C091 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.91■□□□□ 0.78
FREM3P0C091 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FREM3P0C091 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM3P0C091 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
FREM3P0C091 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.91■□□□□ 0.78
FREM3P0C091 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FREM3P0C091 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM3P0C091 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.91■□□□□ 0.78
FREM3P0C091 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM3P0C091 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.91■□□□□ 0.78
FREM3P0C091 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.91■□□□□ 0.78
FREM3P0C091 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM3P0C091 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM3P0C091 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
FREM3P0C091 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.91■□□□□ 0.78
FREM3P0C091 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
FREM3P0C091 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
FREM3P0C091 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FREM3P0C091 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
FREM3P0C091 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM3P0C091 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM3P0C091 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FREM3P0C091 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.9■□□□□ 0.78
FREM3P0C091 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.9■□□□□ 0.78
FREM3P0C091 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM3P0C091 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.89■□□□□ 0.78
FREM3P0C091 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.89■□□□□ 0.77
FREM3P0C091 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.89■□□□□ 0.77
FREM3P0C091 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.89■□□□□ 0.77
FREM3P0C091 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM3P0C091 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
FREM3P0C091 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 AL358852.1-201ENST00000623174 1268 ntBASIC19.88■□□□□ 0.77
FREM3P0C091 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM3P0C091 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms