Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
POLR3DP05423 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.2■■□□□ 1.78
POLR3DP05423 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
POLR3DP05423 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.19■■□□□ 1.78
POLR3DP05423 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3DP05423 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.19■■□□□ 1.78
POLR3DP05423 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3DP05423 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.19■■□□□ 1.78
POLR3DP05423 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.19■■□□□ 1.78
POLR3DP05423 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
POLR3DP05423 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.19■■□□□ 1.78
POLR3DP05423 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3DP05423 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3DP05423 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3DP05423 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.18■■□□□ 1.78
POLR3DP05423 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3DP05423 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3DP05423 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3DP05423 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.18■■□□□ 1.78
POLR3DP05423 AL354811.1-201ENST00000610286 706 ntBASIC26.18■■□□□ 1.78
POLR3DP05423 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.18■■□□□ 1.78
POLR3DP05423 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
POLR3DP05423 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
POLR3DP05423 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
POLR3DP05423 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
POLR3DP05423 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.17■■□□□ 1.78
POLR3DP05423 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3DP05423 AC092666.2-201ENST00000613287 246 ntBASIC26.17■■□□□ 1.78
POLR3DP05423 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3DP05423 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3DP05423 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.17■■□□□ 1.78
POLR3DP05423 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.17■■□□□ 1.78
POLR3DP05423 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3DP05423 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3DP05423 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3DP05423 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3DP05423 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3DP05423 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3DP05423 YBX1P1-201ENST00000445822 960 ntBASIC26.16■■□□□ 1.78
POLR3DP05423 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3DP05423 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.16■■□□□ 1.78
POLR3DP05423 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.16■■□□□ 1.78
POLR3DP05423 AC092068.2-201ENST00000590491 1708 ntBASIC26.16■■□□□ 1.78
POLR3DP05423 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3DP05423 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3DP05423 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.15■■□□□ 1.78
POLR3DP05423 AC068473.5-201ENST00000616428 2072 ntBASIC26.15■■□□□ 1.78
POLR3DP05423 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3DP05423 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3DP05423 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
POLR3DP05423 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3DP05423 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.15■■□□□ 1.78
POLR3DP05423 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3DP05423 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.15■■□□□ 1.78
POLR3DP05423 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.14■■□□□ 1.78
POLR3DP05423 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3DP05423 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
POLR3DP05423 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3DP05423 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.14■■□□□ 1.78
POLR3DP05423 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3DP05423 AC027612.3-201ENST00000413684 1047 ntBASIC26.14■■□□□ 1.78
POLR3DP05423 AL162430.1-201ENST00000480705 870 ntBASIC26.14■■□□□ 1.78
POLR3DP05423 AC105233.4-201ENST00000642045 216 ntBASIC26.14■■□□□ 1.78
POLR3DP05423 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
POLR3DP05423 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
POLR3DP05423 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
POLR3DP05423 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.14■■□□□ 1.77
POLR3DP05423 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.14■■□□□ 1.77
POLR3DP05423 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
POLR3DP05423 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
POLR3DP05423 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
POLR3DP05423 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
POLR3DP05423 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.13■■□□□ 1.77
POLR3DP05423 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.13■■□□□ 1.77
POLR3DP05423 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.13■■□□□ 1.77
POLR3DP05423 AC068587.7-201ENST00000641602 218 ntBASIC26.13■■□□□ 1.77
POLR3DP05423 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
POLR3DP05423 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.13■■□□□ 1.77
POLR3DP05423 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.12■■□□□ 1.77
POLR3DP05423 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.12■■□□□ 1.77
POLR3DP05423 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.12■■□□□ 1.77
POLR3DP05423 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.12■■□□□ 1.77
POLR3DP05423 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.12■■□□□ 1.77
POLR3DP05423 AC104564.3-201ENST00000582367 638 ntBASIC26.12■■□□□ 1.77
POLR3DP05423 AL031602.1-201ENST00000633169 911 ntBASIC26.12■■□□□ 1.77
POLR3DP05423 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.12■■□□□ 1.77
POLR3DP05423 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.12■■□□□ 1.77
POLR3DP05423 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3DP05423 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.11■■□□□ 1.77
POLR3DP05423 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.11■■□□□ 1.77
POLR3DP05423 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
POLR3DP05423 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms