Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC1P02654 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APOC1P02654 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOC1P02654 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.26■□□□□ 0.67
APOC1P02654 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
APOC1P02654 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC1P02654 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.25■□□□□ 0.67
APOC1P02654 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.25■□□□□ 0.67
APOC1P02654 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
APOC1P02654 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.25■□□□□ 0.67
APOC1P02654 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.25■□□□□ 0.67
APOC1P02654 KRT16P3-201ENST00000439127 1283 ntBASIC19.25■□□□□ 0.67
APOC1P02654 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
APOC1P02654 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.25■□□□□ 0.67
APOC1P02654 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.25■□□□□ 0.67
APOC1P02654 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 AL117332.1-201ENST00000622628 974 ntBASIC19.25■□□□□ 0.67
APOC1P02654 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
APOC1P02654 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
APOC1P02654 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC1P02654 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
APOC1P02654 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.24■□□□□ 0.67
APOC1P02654 UNC93B8-201ENST00000511903 705 ntBASIC19.24■□□□□ 0.67
APOC1P02654 AC241377.3-202ENST00000626088 1088 ntBASIC19.24■□□□□ 0.67
APOC1P02654 AC241585.3-202ENST00000628937 1088 ntBASIC19.24■□□□□ 0.67
APOC1P02654 AC245100.8-202ENST00000629247 1058 ntBASIC19.24■□□□□ 0.67
APOC1P02654 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
APOC1P02654 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.24■□□□□ 0.67
APOC1P02654 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
APOC1P02654 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC1P02654 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
APOC1P02654 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
APOC1P02654 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.23■□□□□ 0.67
APOC1P02654 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
APOC1P02654 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.23■□□□□ 0.67
APOC1P02654 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 LINC00526-201ENST00000581067 1875 ntBASIC19.23■□□□□ 0.67
APOC1P02654 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.23■□□□□ 0.67
APOC1P02654 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.23■□□□□ 0.67
APOC1P02654 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.23■□□□□ 0.67
APOC1P02654 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
APOC1P02654 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOC1P02654 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
APOC1P02654 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.22■□□□□ 0.67
APOC1P02654 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
APOC1P02654 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.22■□□□□ 0.67
APOC1P02654 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
APOC1P02654 AL035685.1-201ENST00000636663 812 ntBASIC19.22■□□□□ 0.67
APOC1P02654 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
APOC1P02654 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
APOC1P02654 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.22■□□□□ 0.67
APOC1P02654 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC1P02654 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
APOC1P02654 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
APOC1P02654 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.21■□□□□ 0.67
APOC1P02654 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.21■□□□□ 0.67
APOC1P02654 AL356740.2-201ENST00000601559 647 ntBASIC19.21■□□□□ 0.67
APOC1P02654 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC1P02654 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOC1P02654 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOC1P02654 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
APOC1P02654 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms