Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.93■□□□□ 0.62
HLA-DQB1P01920 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.93■□□□□ 0.62
HLA-DQB1P01920 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB1P01920 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB1P01920 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 MIR6765-201ENST00000614092 87 ntBASIC18.91■□□□□ 0.62
HLA-DQB1P01920 AC011551.1-201ENST00000614101 683 ntBASIC18.91■□□□□ 0.62
HLA-DQB1P01920 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQB1P01920 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 FEM1AP4-201ENST00000443167 1987 ntBASIC18.9■□□□□ 0.62
HLA-DQB1P01920 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DQB1P01920 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQB1P01920 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQB1P01920 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 Z98882.1-201ENST00000622160 2253 ntBASIC18.89■□□□□ 0.61
HLA-DQB1P01920 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQB1P01920 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 LONRF2P2-201ENST00000439212 571 ntBASIC18.88■□□□□ 0.61
HLA-DQB1P01920 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DQB1P01920 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB1P01920 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms