Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLDN1O95832 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN1O95832 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLDN1O95832 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 TSPY6P-201ENST00000448518 926 ntBASIC19.52■□□□□ 0.72
CLDN1O95832 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLDN1O95832 AL121832.2-201ENST00000610979 668 ntBASIC19.52■□□□□ 0.72
CLDN1O95832 AL050303.2-201ENST00000619798 666 ntBASIC19.52■□□□□ 0.72
CLDN1O95832 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN1O95832 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN1O95832 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN1O95832 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN1O95832 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CLDN1O95832 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN1O95832 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 AC083906.2-201ENST00000511578 360 ntBASIC19.51■□□□□ 0.71
CLDN1O95832 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDN1O95832 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.51■□□□□ 0.71
CLDN1O95832 AC008687.6-201ENST00000596318 630 ntBASIC19.51■□□□□ 0.71
CLDN1O95832 AL139125.2-201ENST00000623134 1869 ntBASIC19.51■□□□□ 0.71
CLDN1O95832 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN1O95832 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 KRT18P11-201ENST00000435214 1283 ntBASIC19.5■□□□□ 0.71
CLDN1O95832 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.5■□□□□ 0.71
CLDN1O95832 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN1O95832 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 GUSBP6-202ENST00000438529 1198 ntBASIC19.49■□□□□ 0.71
CLDN1O95832 MIR6089-201ENST00000616698 64 ntBASIC19.49■□□□□ 0.71
CLDN1O95832 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN1O95832 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN1O95832 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN1O95832 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN1O95832 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLDN1O95832 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN1O95832 AL138781.1-201ENST00000566567 1274 ntBASIC19.48■□□□□ 0.71
CLDN1O95832 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN1O95832 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.48■□□□□ 0.71
CLDN1O95832 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN1O95832 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLDN1O95832 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLDN1O95832 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN1O95832 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLDN1O95832 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN1O95832 SLC6A10P-202ENST00000431994 2058 ntBASIC19.47■□□□□ 0.71
CLDN1O95832 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN1O95832 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN1O95832 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN1O95832 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN1O95832 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLDN1O95832 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.46■□□□□ 0.71
CLDN1O95832 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN1O95832 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN1O95832 SLC7A5P2-201ENST00000553010 536 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms