Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB3DO95716 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB3DO95716 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB3DO95716 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB3DO95716 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB3DO95716 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3DO95716 LONRF2P2-201ENST00000439212 571 ntBASIC18.58■□□□□ 0.56
RAB3DO95716 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB3DO95716 MIR6765-201ENST00000614092 87 ntBASIC18.58■□□□□ 0.56
RAB3DO95716 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3DO95716 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3DO95716 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB3DO95716 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB3DO95716 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB3DO95716 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB3DO95716 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3DO95716 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3DO95716 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB3DO95716 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3DO95716 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
RAB3DO95716 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB3DO95716 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAB3DO95716 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
RAB3DO95716 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3DO95716 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB3DO95716 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 GPX1-201ENST00000419349 1106 ntBASIC18.56■□□□□ 0.56
RAB3DO95716 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RAB3DO95716 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB3DO95716 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3DO95716 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3DO95716 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3DO95716 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3DO95716 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB3DO95716 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB3DO95716 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3DO95716 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3DO95716 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RAB3DO95716 AL592293.1-201ENST00000502889 1188 ntBASIC18.55■□□□□ 0.56
RAB3DO95716 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3DO95716 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB3DO95716 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3DO95716 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3DO95716 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3DO95716 AC244015.2-201ENST00000616358 1861 ntBASIC18.54■□□□□ 0.56
RAB3DO95716 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB3DO95716 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3DO95716 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3DO95716 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3DO95716 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAB3DO95716 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 AC144652.1-201ENST00000609974 1624 ntBASIC18.53■□□□□ 0.56
RAB3DO95716 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB3DO95716 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB3DO95716 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB3DO95716 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3DO95716 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB3DO95716 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB3DO95716 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
RAB3DO95716 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RAB3DO95716 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB3DO95716 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB3DO95716 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB3DO95716 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3DO95716 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RAB3DO95716 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
RAB3DO95716 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RAB3DO95716 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms