Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.91■■□□□ 1.58
CCNT1O60563 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.91■■□□□ 1.58
CCNT1O60563 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCNT1O60563 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CCNT1O60563 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCNT1O60563 AP001330.3-201ENST00000520123 633 ntBASIC24.91■■□□□ 1.58
CCNT1O60563 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNT1O60563 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNT1O60563 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.91■■□□□ 1.58
CCNT1O60563 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNT1O60563 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNT1O60563 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCNT1O60563 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCNT1O60563 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CCNT1O60563 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.9■■□□□ 1.58
CCNT1O60563 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.9■■□□□ 1.58
CCNT1O60563 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CCNT1O60563 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.9■■□□□ 1.58
CCNT1O60563 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.9■■□□□ 1.58
CCNT1O60563 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CCNT1O60563 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
CCNT1O60563 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCNT1O60563 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.9■■□□□ 1.58
CCNT1O60563 AC012676.1-201ENST00000574705 1949 ntBASIC24.9■■□□□ 1.58
CCNT1O60563 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCNT1O60563 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CCNT1O60563 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CCNT1O60563 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CCNT1O60563 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
CCNT1O60563 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CCNT1O60563 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.89■■□□□ 1.58
CCNT1O60563 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCNT1O60563 AC099791.1-201ENST00000416440 715 ntBASIC24.89■■□□□ 1.58
CCNT1O60563 AF213884.3-201ENST00000563833 479 ntBASIC24.89■■□□□ 1.58
CCNT1O60563 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CCNT1O60563 AC005837.3-201ENST00000612163 286 ntBASIC24.89■■□□□ 1.58
CCNT1O60563 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNT1O60563 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CCNT1O60563 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
CCNT1O60563 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CCNT1O60563 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.88■■□□□ 1.57
CCNT1O60563 AC233723.2-201ENST00000623798 2106 ntBASIC24.88■■□□□ 1.57
CCNT1O60563 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
CCNT1O60563 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.88■■□□□ 1.57
CCNT1O60563 SUDS3P1-201ENST00000505831 966 ntBASIC24.88■■□□□ 1.57
CCNT1O60563 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.88■■□□□ 1.57
CCNT1O60563 AC027682.1-201ENST00000562846 899 ntBASIC24.88■■□□□ 1.57
CCNT1O60563 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.88■■□□□ 1.57
CCNT1O60563 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 AL136967.2-201ENST00000623968 743 ntBASIC24.88■■□□□ 1.57
CCNT1O60563 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CCNT1O60563 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNT1O60563 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
CCNT1O60563 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNT1O60563 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCNT1O60563 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNT1O60563 ESRRAP2-201ENST00000418437 1549 ntBASIC24.87■■□□□ 1.57
CCNT1O60563 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNT1O60563 MIR939-201ENST00000401314 82 ntBASIC24.87■■□□□ 1.57
CCNT1O60563 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNT1O60563 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNT1O60563 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
CCNT1O60563 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CCNT1O60563 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNT1O60563 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNT1O60563 AC126544.1-201ENST00000580842 1059 ntBASIC24.86■■□□□ 1.57
CCNT1O60563 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNT1O60563 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNT1O60563 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNT1O60563 AC142381.2-201ENST00000566120 298 ntBASIC24.85■■□□□ 1.57
CCNT1O60563 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CCNT1O60563 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.85■■□□□ 1.57
CCNT1O60563 AC068587.7-201ENST00000641602 218 ntBASIC24.85■■□□□ 1.57
CCNT1O60563 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNT1O60563 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNT1O60563 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CCNT1O60563 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNT1O60563 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCNT1O60563 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCNT1O60563 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CCNT1O60563 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.84■■□□□ 1.57
CCNT1O60563 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.84■■□□□ 1.57
CCNT1O60563 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CCNT1O60563 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCNT1O60563 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms