Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 MIR6724-1-201ENST00000616420 92 ntBASIC19.29■□□□□ 0.68
GMDSO60547 MIR6724-2-201ENST00000616483 92 ntBASIC19.29■□□□□ 0.68
GMDSO60547 MIR6724-4-201ENST00000617390 92 ntBASIC19.29■□□□□ 0.68
GMDSO60547 MIR6724-3-201ENST00000622482 92 ntBASIC19.29■□□□□ 0.68
GMDSO60547 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.29■□□□□ 0.68
GMDSO60547 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GMDSO60547 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GMDSO60547 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GMDSO60547 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.29■□□□□ 0.68
GMDSO60547 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GMDSO60547 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GMDSO60547 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GMDSO60547 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GMDSO60547 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GMDSO60547 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.28■□□□□ 0.68
GMDSO60547 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GMDSO60547 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GMDSO60547 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GMDSO60547 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GMDSO60547 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GMDSO60547 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GMDSO60547 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.27■□□□□ 0.68
GMDSO60547 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GMDSO60547 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.27■□□□□ 0.68
GMDSO60547 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
GMDSO60547 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.27■□□□□ 0.68
GMDSO60547 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GMDSO60547 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GMDSO60547 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.27■□□□□ 0.67
GMDSO60547 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
GMDSO60547 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.26■□□□□ 0.67
GMDSO60547 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.26■□□□□ 0.67
GMDSO60547 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GMDSO60547 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GMDSO60547 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.26■□□□□ 0.67
GMDSO60547 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
GMDSO60547 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.26■□□□□ 0.67
GMDSO60547 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.26■□□□□ 0.67
GMDSO60547 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GMDSO60547 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GMDSO60547 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GMDSO60547 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.26■□□□□ 0.67
GMDSO60547 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.26■□□□□ 0.67
GMDSO60547 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GMDSO60547 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GMDSO60547 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.25■□□□□ 0.67
GMDSO60547 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.25■□□□□ 0.67
GMDSO60547 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GMDSO60547 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GMDSO60547 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
GMDSO60547 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GMDSO60547 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GMDSO60547 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GMDSO60547 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GMDSO60547 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.25■□□□□ 0.67
GMDSO60547 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.25■□□□□ 0.67
GMDSO60547 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GMDSO60547 AL353803.4-201ENST00000565882 1934 ntBASIC19.25■□□□□ 0.67
GMDSO60547 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.25■□□□□ 0.67
GMDSO60547 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GMDSO60547 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GMDSO60547 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GMDSO60547 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GMDSO60547 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GMDSO60547 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.24■□□□□ 0.67
GMDSO60547 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GMDSO60547 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GMDSO60547 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GMDSO60547 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GMDSO60547 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.24■□□□□ 0.67
GMDSO60547 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
GMDSO60547 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.23■□□□□ 0.67
GMDSO60547 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.23■□□□□ 0.67
GMDSO60547 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GMDSO60547 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.23■□□□□ 0.67
GMDSO60547 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.23■□□□□ 0.67
GMDSO60547 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.23■□□□□ 0.67
GMDSO60547 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GMDSO60547 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GMDSO60547 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GMDSO60547 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.22■□□□□ 0.67
GMDSO60547 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GMDSO60547 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GMDSO60547 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.22■□□□□ 0.67
GMDSO60547 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.22■□□□□ 0.67
GMDSO60547 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GMDSO60547 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.22■□□□□ 0.67
GMDSO60547 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.22■□□□□ 0.67
GMDSO60547 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GMDSO60547 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
GMDSO60547 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.22■□□□□ 0.67
GMDSO60547 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GMDSO60547 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.22■□□□□ 0.67
GMDSO60547 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GMDSO60547 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GMDSO60547 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GMDSO60547 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GMDSO60547 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GMDSO60547 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.21■□□□□ 0.67
GMDSO60547 ESRRAP2-201ENST00000418437 1549 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms