Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA12O60330 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.73■■□□□ 1.07
PCDHGA12O60330 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA12O60330 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA12O60330 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA12O60330 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA12O60330 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA12O60330 LINC01529-204ENST00000636474 1715 ntBASIC21.72■■□□□ 1.07
PCDHGA12O60330 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA12O60330 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA12O60330 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA12O60330 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA12O60330 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHGA12O60330 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA12O60330 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA12O60330 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA12O60330 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA12O60330 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 AC006015.1-201ENST00000429970 570 ntBASIC21.7■■□□□ 1.06
PCDHGA12O60330 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGA12O60330 AC144652.1-201ENST00000609974 1624 ntBASIC21.69■■□□□ 1.06
PCDHGA12O60330 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA12O60330 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGA12O60330 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA12O60330 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDHGA12O60330 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA12O60330 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA12O60330 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGA12O60330 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
PCDHGA12O60330 HLA-L-209ENST00000420110 1011 ntBASIC21.67■■□□□ 1.06
PCDHGA12O60330 AC080038.1-201ENST00000611274 1154 ntBASIC21.67■■□□□ 1.06
PCDHGA12O60330 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA12O60330 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA12O60330 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA12O60330 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA12O60330 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHGA12O60330 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGA12O60330 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA12O60330 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PCDHGA12O60330 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.65■■□□□ 1.06
PCDHGA12O60330 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA12O60330 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms