Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSSCA1O60232 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSSCA1O60232 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SSSCA1O60232 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSSCA1O60232 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.83■□□□□ 0.44
SSSCA1O60232 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.83■□□□□ 0.44
SSSCA1O60232 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SSSCA1O60232 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSSCA1O60232 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSSCA1O60232 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SSSCA1O60232 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SSSCA1O60232 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SSSCA1O60232 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.82■□□□□ 0.44
SSSCA1O60232 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SSSCA1O60232 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSSCA1O60232 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.81■□□□□ 0.44
SSSCA1O60232 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSSCA1O60232 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SSSCA1O60232 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SSSCA1O60232 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.81■□□□□ 0.44
SSSCA1O60232 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.81■□□□□ 0.44
SSSCA1O60232 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.81■□□□□ 0.44
SSSCA1O60232 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSSCA1O60232 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSSCA1O60232 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SSSCA1O60232 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SSSCA1O60232 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SSSCA1O60232 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.8■□□□□ 0.44
SSSCA1O60232 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.8■□□□□ 0.44
SSSCA1O60232 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.8■□□□□ 0.44
SSSCA1O60232 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SSSCA1O60232 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSSCA1O60232 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.79■□□□□ 0.44
SSSCA1O60232 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.79■□□□□ 0.44
SSSCA1O60232 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 AC073130.3-201ENST00000624389 2278 ntBASIC17.79■□□□□ 0.44
SSSCA1O60232 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.79■□□□□ 0.44
SSSCA1O60232 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSSCA1O60232 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSSCA1O60232 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.79■□□□□ 0.44
SSSCA1O60232 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.78■□□□□ 0.44
SSSCA1O60232 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSSCA1O60232 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SSSCA1O60232 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.78■□□□□ 0.44
SSSCA1O60232 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSSCA1O60232 AC144652.1-201ENST00000609974 1624 ntBASIC17.78■□□□□ 0.44
SSSCA1O60232 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSSCA1O60232 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSSCA1O60232 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.78■□□□□ 0.44
SSSCA1O60232 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.78■□□□□ 0.44
SSSCA1O60232 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.77■□□□□ 0.44
SSSCA1O60232 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.77■□□□□ 0.44
SSSCA1O60232 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.77■□□□□ 0.44
SSSCA1O60232 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.77■□□□□ 0.44
SSSCA1O60232 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSSCA1O60232 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SSSCA1O60232 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSSCA1O60232 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSSCA1O60232 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SSSCA1O60232 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SSSCA1O60232 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SSSCA1O60232 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SSSCA1O60232 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSSCA1O60232 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSSCA1O60232 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.76■□□□□ 0.43
SSSCA1O60232 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SSSCA1O60232 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms