Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.1■□□□□ 0.97
PRICKLE3O43900 AC105265.2-201ENST00000467189 838 ntBASIC21.1■□□□□ 0.97
PRICKLE3O43900 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.1■□□□□ 0.97
PRICKLE3O43900 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.1■□□□□ 0.97
PRICKLE3O43900 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRICKLE3O43900 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.1■□□□□ 0.97
PRICKLE3O43900 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRICKLE3O43900 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRICKLE3O43900 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRICKLE3O43900 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.09■□□□□ 0.97
PRICKLE3O43900 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRICKLE3O43900 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.09■□□□□ 0.97
PRICKLE3O43900 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRICKLE3O43900 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRICKLE3O43900 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PRICKLE3O43900 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.08■□□□□ 0.97
PRICKLE3O43900 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRICKLE3O43900 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRICKLE3O43900 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRICKLE3O43900 ZNRF2P3-201ENST00000424200 374 ntBASIC21.08■□□□□ 0.97
PRICKLE3O43900 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRICKLE3O43900 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRICKLE3O43900 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.08■□□□□ 0.96
PRICKLE3O43900 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRICKLE3O43900 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.07■□□□□ 0.96
PRICKLE3O43900 TSPY26P-201ENST00000476365 1326 ntBASIC21.07■□□□□ 0.96
PRICKLE3O43900 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.07■□□□□ 0.96
PRICKLE3O43900 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 AC010141.3-201ENST00000456659 717 ntBASIC21.07■□□□□ 0.96
PRICKLE3O43900 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PRICKLE3O43900 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.07■□□□□ 0.96
PRICKLE3O43900 C1orf229-201ENST00000623686 2258 ntBASIC21.07■□□□□ 0.96
PRICKLE3O43900 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.07■□□□□ 0.96
PRICKLE3O43900 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRICKLE3O43900 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRICKLE3O43900 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRICKLE3O43900 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PRICKLE3O43900 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRICKLE3O43900 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.05■□□□□ 0.96
PRICKLE3O43900 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.05■□□□□ 0.96
PRICKLE3O43900 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.05■□□□□ 0.96
PRICKLE3O43900 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.05■□□□□ 0.96
PRICKLE3O43900 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRICKLE3O43900 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRICKLE3O43900 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 AC068473.5-201ENST00000616428 2072 ntBASIC21.04■□□□□ 0.96
PRICKLE3O43900 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRICKLE3O43900 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.04■□□□□ 0.96
PRICKLE3O43900 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRICKLE3O43900 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PRICKLE3O43900 ESRRAP2-201ENST00000418437 1549 ntBASIC21.04■□□□□ 0.96
PRICKLE3O43900 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PRICKLE3O43900 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRICKLE3O43900 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRICKLE3O43900 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 MIR572-201ENST00000384983 95 ntBASIC21.03■□□□□ 0.96
PRICKLE3O43900 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRICKLE3O43900 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRICKLE3O43900 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRICKLE3O43900 OXCT2P1-201ENST00000447263 1535 ntBASIC21.03■□□□□ 0.96
PRICKLE3O43900 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.03■□□□□ 0.96
PRICKLE3O43900 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRICKLE3O43900 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRICKLE3O43900 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.02■□□□□ 0.96
PRICKLE3O43900 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PRICKLE3O43900 AC087239.1-201ENST00000622671 572 ntBASIC21.02■□□□□ 0.96
PRICKLE3O43900 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRICKLE3O43900 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms