Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.03■■□□□ 1.12
MID1O15344 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
MID1O15344 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.03■■□□□ 1.12
MID1O15344 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MID1O15344 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MID1O15344 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MID1O15344 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MID1O15344 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MID1O15344 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
MID1O15344 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
MID1O15344 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.02■■□□□ 1.12
MID1O15344 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.02■■□□□ 1.12
MID1O15344 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MID1O15344 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.02■■□□□ 1.12
MID1O15344 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.02■■□□□ 1.12
MID1O15344 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MID1O15344 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MID1O15344 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
MID1O15344 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
MID1O15344 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
MID1O15344 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MID1O15344 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.01■■□□□ 1.11
MID1O15344 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
MID1O15344 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MID1O15344 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
MID1O15344 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.01■■□□□ 1.11
MID1O15344 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.01■■□□□ 1.11
MID1O15344 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.01■■□□□ 1.11
MID1O15344 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.01■■□□□ 1.11
MID1O15344 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
MID1O15344 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MID1O15344 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
MID1O15344 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MID1O15344 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MID1O15344 AC092068.2-201ENST00000590491 1708 ntBASIC22■■□□□ 1.11
MID1O15344 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22■■□□□ 1.11
MID1O15344 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MID1O15344 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
MID1O15344 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22■■□□□ 1.11
MID1O15344 AC092437.1-201ENST00000624794 1048 ntBASIC22■■□□□ 1.11
MID1O15344 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
MID1O15344 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22■■□□□ 1.11
MID1O15344 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
MID1O15344 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22■■□□□ 1.11
MID1O15344 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.99■■□□□ 1.11
MID1O15344 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MID1O15344 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
MID1O15344 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.99■■□□□ 1.11
MID1O15344 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MID1O15344 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MID1O15344 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MID1O15344 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
MID1O15344 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
MID1O15344 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.99■■□□□ 1.11
MID1O15344 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.99■■□□□ 1.11
MID1O15344 TPRG1LP1-201ENST00000598702 760 ntBASIC21.99■■□□□ 1.11
MID1O15344 AL137784.2-201ENST00000607332 1000 ntBASIC21.99■■□□□ 1.11
MID1O15344 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MID1O15344 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MID1O15344 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
MID1O15344 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MID1O15344 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.98■■□□□ 1.11
MID1O15344 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MID1O15344 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MID1O15344 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MID1O15344 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MID1O15344 SMUG1P1-201ENST00000590640 811 ntBASIC21.98■■□□□ 1.11
MID1O15344 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.98■■□□□ 1.11
MID1O15344 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.98■■□□□ 1.11
MID1O15344 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.98■■□□□ 1.11
MID1O15344 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MID1O15344 BX005040.4-201ENST00000637145 1518 ntBASIC21.97■■□□□ 1.11
MID1O15344 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MID1O15344 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MID1O15344 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MID1O15344 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MID1O15344 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.97■■□□□ 1.11
MID1O15344 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MID1O15344 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MID1O15344 DUSP8P3-201ENST00000399571 1760 ntBASIC21.97■■□□□ 1.11
MID1O15344 OXCT2P1-201ENST00000447263 1535 ntBASIC21.96■■□□□ 1.11
MID1O15344 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
MID1O15344 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MID1O15344 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MID1O15344 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MID1O15344 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.96■■□□□ 1.11
MID1O15344 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MID1O15344 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
MID1O15344 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MID1O15344 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.96■■□□□ 1.11
MID1O15344 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.96■■□□□ 1.11
MID1O15344 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MID1O15344 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
MID1O15344 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MID1O15344 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.95■■□□□ 1.1
MID1O15344 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MID1O15344 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.95■■□□□ 1.1
MID1O15344 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MID1O15344 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
MID1O15344 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms