| WNT9A | O14904 | SIX3-201 | ENST00000260653 | 2523 nt | APPRIS P1 TSL 1 (best) BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | TSPAN2-201 | ENST00000369515 | 793 nt | TSL 3 BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | NINJ1-201 | ENST00000375446 | 1281 nt | APPRIS P1 TSL 1 (best) BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | AC108002.2-201 | ENST00000519782 | 340 nt | TSL 4 BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | SLC25A45-206 | ENST00000526432 | 894 nt | TSL 1 (best) BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | TSEN15-207 | ENST00000533373 | 618 nt | TSL 2 BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | OTUB1-212 | ENST00000543988 | 1259 nt | TSL 1 (best) BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | SLC35A2-212 | ENST00000634665 | 486 nt | TSL 4 BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | KRTAP5-7-201 | ENST00000398536 | 1408 nt | APPRIS P1 BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | STK19-202 | ENST00000375333 | 1557 nt | APPRIS P3 TSL 1 (best) BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | FAM102B-202 | ENST00000405454 | 1585 nt | APPRIS ALT2 TSL 5 BASIC | 22.04 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | IRF3-207 | ENST00000593922 | 1494 nt | TSL 1 (best) BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | HOXD1-201 | ENST00000331462 | 1975 nt | APPRIS P1 TSL 1 (best) BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | RTL8C-201 | ENST00000257013 | 1181 nt | APPRIS P1 BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | AURKAIP1-204 | ENST00000378853 | 875 nt | APPRIS P1 TSL 2 BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | CCDC115-202 | ENST00000409127 | 1247 nt | TSL 2 BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | POLR2H-204 | ENST00000438240 | 994 nt | TSL 3 BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | TMEM70-203 | ENST00000517439 | 617 nt | TSL 2 BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | RHBDL3-204 | ENST00000538145 | 1338 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | ST3GAL4-202 | ENST00000356132 | 1745 nt | TSL 5 BASIC | 22.03 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | FRS3-202 | ENST00000373018 | 2174 nt | APPRIS P1 TSL 3 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | NKIRAS2-206 | ENST00000393885 | 1909 nt | APPRIS P1 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | STK19-201 | ENST00000375331 | 1663 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | CTDSPL-206 | ENST00000443503 | 4640 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | MPC1-202 | ENST00000360961 | 962 nt | APPRIS P2 TSL 5 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | EIF6-203 | ENST00000374450 | 1289 nt | APPRIS P1 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | INS-202 | ENST00000381330 | 597 nt | APPRIS P1 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | STOML2-202 | ENST00000452248 | 1296 nt | TSL 2 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | AC093817.1-201 | ENST00000507296 | 812 nt | TSL 3 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | STOML2-205 | ENST00000619795 | 1293 nt | TSL 3 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | POLR2E-214 | ENST00000619917 | 932 nt | TSL 5 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | LMTK3-201 | ENST00000270238 | 4972 nt | APPRIS P2 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | SPI1-202 | ENST00000378538 | 1403 nt | APPRIS P3 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | CDCP1-202 | ENST00000425231 | 1416 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | C3orf58-207 | ENST00000495414 | 1876 nt | TSL 2 BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | CDC16-206 | ENST00000375310 | 2156 nt | TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | SETD9-211 | ENST00000628593 | 1306 nt | TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.12 | | |
| WNT9A | O14904 | ZSCAN18-212 | ENST00000600404 | 1934 nt | APPRIS ALT2 TSL 2 BASIC | 22.02 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AC068473.5-201 | ENST00000616428 | 2072 nt | BASIC | 22.02 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AGAP3-201 | ENST00000335367 | 2675 nt | TSL 1 (best) BASIC | 22.02 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | EN1-201 | ENST00000295206 | 2457 nt | APPRIS P1 TSL 2 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | ZYX-201 | ENST00000322764 | 2493 nt | APPRIS P2 TSL 1 (best) BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | CPNE2-202 | ENST00000535318 | 2316 nt | APPRIS P1 TSL 1 (best) BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | PRSS29P-202 | ENST00000568091 | 1864 nt | TSL 5 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | KDELR1-203 | ENST00000597017 | 1594 nt | TSL 2 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | GP9-201 | ENST00000307395 | 889 nt | APPRIS P1 TSL 1 (best) BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | PRMT2-204 | ENST00000397628 | 954 nt | TSL 2 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | CKLF-205 | ENST00000417030 | 628 nt | APPRIS ALT2 TSL 4 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | YJEFN3-203 | ENST00000514277 | 995 nt | TSL 1 (best) BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AC104986.2-201 | ENST00000521696 | 380 nt | TSL 2 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | RPLP2-207 | ENST00000530797 | 637 nt | APPRIS P1 TSL 1 (best) BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | RAB6A-204 | ENST00000536566 | 1267 nt | TSL 5 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | LRRC37A17P-202 | ENST00000570478 | 572 nt | TSL 4 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | CACTIN-AS1-201 | ENST00000592274 | 1913 nt | TSL 2 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | MRPS2-202 | ENST00000371785 | 1640 nt | APPRIS P1 TSL 3 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | STX4-202 | ENST00000394998 | 1498 nt | TSL 2 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | DUSP8P5-201 | ENST00000422884 | 1815 nt | BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | LEF1-AS1-207 | ENST00000512637 | 1675 nt | TSL 1 (best) BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | SPAG7-205 | ENST00000573366 | 1668 nt | TSL 3 BASIC | 22.01 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | GALK1-201 | ENST00000225614 | 1445 nt | APPRIS P1 TSL 2 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | HOXA10-206 | ENST00000613671 | 2175 nt | TSL 5 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | KRTAP5-2-201 | ENST00000412090 | 1118 nt | APPRIS P1 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AC123595.1-201 | ENST00000440769 | 1046 nt | BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | ATOX1-207 | ENST00000524142 | 749 nt | APPRIS P1 TSL 5 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | GALNS-211 | ENST00000568311 | 703 nt | TSL 1 (best) BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | CCDC92B-201 | ENST00000575506 | 885 nt | BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AC092437.1-201 | ENST00000624794 | 1048 nt | BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | PHC2-202 | ENST00000373418 | 2550 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | ZMYND11-210 | ENST00000403354 | 1664 nt | TSL 5 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | ST3GAL5-268 | ENST00000640982 | 2465 nt | APPRIS ALT2 TSL 5 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AC096677.1-201 | ENST00000454651 | 1516 nt | TSL 2 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | OAZ2-201 | ENST00000326005 | 1934 nt | APPRIS P1 TSL 5 BASIC | 22 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | SRPK3-203 | ENST00000370104 | 1753 nt | APPRIS ALT2 TSL 1 (best) BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | DUSP8P3-201 | ENST00000399571 | 1760 nt | BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AL137002.2-201 | ENST00000639766 | 2238 nt | TSL 5 BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | CTNNAL1-202 | ENST00000374593 | 761 nt | TSL 3 BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | PRKCQ-AS1-204 | ENST00000455810 | 920 nt | TSL 2 BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | AL354811.1-201 | ENST00000610286 | 706 nt | BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | DAZAP1-201 | ENST00000233078 | 2160 nt | APPRIS P2 TSL 1 (best) BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | ERF-201 | ENST00000222329 | 2698 nt | APPRIS P1 TSL 1 (best) BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | GLT8D2-205 | ENST00000548660 | 1835 nt | APPRIS P1 TSL 2 BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | RASSF5-202 | ENST00000579436 | 2064 nt | APPRIS P1 TSL 1 (best) BASIC | 21.99 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | EID2B-201 | ENST00000326282 | 1865 nt | APPRIS P1 BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | CAPG-201 | ENST00000263867 | 1442 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | ERI3-201 | ENST00000372257 | 1684 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | MRPL37-202 | ENST00000360840 | 1483 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | PEX5-205 | ENST00000420616 | 2477 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | BMP6-201 | ENST00000283147 | 2780 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | C5orf38-201 | ENST00000334000 | 890 nt | APPRIS P3 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | HES6-202 | ENST00000409002 | 1286 nt | APPRIS ALT2 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | IRX5-201 | ENST00000320990 | 2061 nt | APPRIS ALT1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | C16orf72-201 | ENST00000327827 | 5953 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | RAP2A-201 | ENST00000245304 | 5487 nt | APPRIS P1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | PTPRM-201 | ENST00000332175 | 6095 nt | APPRIS P3 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | MAP6D1-201 | ENST00000318631 | 2111 nt | APPRIS P2 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | LACTBL1-201 | ENST00000426928 | 1641 nt | APPRIS P5 TSL 5 BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | RBM42-203 | ENST00000588161 | 1609 nt | APPRIS ALT1 TSL 1 (best) BASIC | 21.98 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | MVD-201 | ENST00000301012 | 1823 nt | APPRIS P1 TSL 1 (best) BASIC | 21.97 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | FAM136A-201 | ENST00000037869 | 1810 nt | APPRIS P1 TSL 1 (best) BASIC | 21.97 | ■■□□□ 1.11 | | |
| WNT9A | O14904 | BBC3-202 | ENST00000341983 | 1538 nt | TSL 1 (best) BASIC | 21.97 | ■■□□□ 1.11 | | |