Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
TRIM38O00635 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM38O00635 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM38O00635 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
TRIM38O00635 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.95■■□□□ 1.11
TRIM38O00635 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM38O00635 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TRIM38O00635 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM38O00635 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
TRIM38O00635 TSPY26P-201ENST00000476365 1326 ntBASIC21.95■■□□□ 1.1
TRIM38O00635 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM38O00635 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM38O00635 ANOS2P-203ENST00000472227 1816 ntBASIC21.94■■□□□ 1.1
TRIM38O00635 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM38O00635 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM38O00635 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRIM38O00635 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.94■■□□□ 1.1
TRIM38O00635 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM38O00635 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM38O00635 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
TRIM38O00635 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRIM38O00635 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM38O00635 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM38O00635 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM38O00635 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM38O00635 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM38O00635 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
TRIM38O00635 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.93■■□□□ 1.1
TRIM38O00635 AC034268.1-201ENST00000441047 882 ntBASIC21.93■■□□□ 1.1
TRIM38O00635 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM38O00635 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM38O00635 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.93■■□□□ 1.1
TRIM38O00635 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TRIM38O00635 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TRIM38O00635 AL031602.1-201ENST00000633169 911 ntBASIC21.93■■□□□ 1.1
TRIM38O00635 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM38O00635 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM38O00635 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM38O00635 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM38O00635 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM38O00635 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TRIM38O00635 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM38O00635 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM38O00635 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM38O00635 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM38O00635 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM38O00635 YBX1P1-201ENST00000445822 960 ntBASIC21.91■■□□□ 1.1
TRIM38O00635 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.91■■□□□ 1.1
TRIM38O00635 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TRIM38O00635 DUSP8P3-201ENST00000399571 1760 ntBASIC21.91■■□□□ 1.1
TRIM38O00635 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM38O00635 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM38O00635 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM38O00635 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM38O00635 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM38O00635 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM38O00635 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.9■■□□□ 1.1
TRIM38O00635 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM38O00635 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM38O00635 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM38O00635 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM38O00635 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM38O00635 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM38O00635 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM38O00635 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM38O00635 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
TRIM38O00635 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
TRIM38O00635 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.89■■□□□ 1.1
TRIM38O00635 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM38O00635 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM38O00635 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM38O00635 IKBKGP1-201ENST00000612193 1073 ntBASIC21.89■■□□□ 1.09
TRIM38O00635 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIM38O00635 LINC00526-201ENST00000581067 1875 ntBASIC21.89■■□□□ 1.09
TRIM38O00635 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM38O00635 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM38O00635 C1orf229-201ENST00000623686 2258 ntBASIC21.89■■□□□ 1.09
TRIM38O00635 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TRIM38O00635 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM38O00635 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM38O00635 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM38O00635 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM38O00635 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM38O00635 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms