Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK2O00526 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK2O00526 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPK2O00526 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPK2O00526 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPK2O00526 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPK2O00526 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UPK2O00526 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.57■□□□□ 0.4
UPK2O00526 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 MIR6724-1-201ENST00000616420 92 ntBASIC17.57■□□□□ 0.4
UPK2O00526 MIR6724-2-201ENST00000616483 92 ntBASIC17.57■□□□□ 0.4
UPK2O00526 MIR6724-4-201ENST00000617390 92 ntBASIC17.57■□□□□ 0.4
UPK2O00526 MIR6724-3-201ENST00000622482 92 ntBASIC17.57■□□□□ 0.4
UPK2O00526 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UPK2O00526 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
UPK2O00526 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.57■□□□□ 0.4
UPK2O00526 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPK2O00526 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK2O00526 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPK2O00526 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK2O00526 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.56■□□□□ 0.4
UPK2O00526 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.56■□□□□ 0.4
UPK2O00526 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK2O00526 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.56■□□□□ 0.4
UPK2O00526 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UPK2O00526 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.56■□□□□ 0.4
UPK2O00526 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.56■□□□□ 0.4
UPK2O00526 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK2O00526 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.56■□□□□ 0.4
UPK2O00526 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.55■□□□□ 0.4
UPK2O00526 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK2O00526 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK2O00526 UNC93B8-201ENST00000511903 705 ntBASIC17.55■□□□□ 0.4
UPK2O00526 AL499627.2-201ENST00000606283 725 ntBASIC17.55■□□□□ 0.4
UPK2O00526 CA15P2-201ENST00000611168 834 ntBASIC17.55■□□□□ 0.4
UPK2O00526 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK2O00526 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UPK2O00526 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UPK2O00526 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPK2O00526 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK2O00526 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.55■□□□□ 0.4
UPK2O00526 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK2O00526 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK2O00526 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK2O00526 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK2O00526 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.54■□□□□ 0.4
UPK2O00526 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
UPK2O00526 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK2O00526 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.54■□□□□ 0.4
UPK2O00526 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.54■□□□□ 0.4
UPK2O00526 AL117332.1-201ENST00000622628 974 ntBASIC17.54■□□□□ 0.4
UPK2O00526 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK2O00526 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UPK2O00526 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK2O00526 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK2O00526 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UPK2O00526 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK2O00526 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK2O00526 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPK2O00526 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
UPK2O00526 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK2O00526 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK2O00526 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.52■□□□□ 0.4
UPK2O00526 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
UPK2O00526 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UPK2O00526 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UPK2O00526 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.52■□□□□ 0.4
UPK2O00526 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK2O00526 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms