Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 SMUG1P1-201ENST00000590640 811 ntBASIC18.26■□□□□ 0.51
RNF223E7ERA6 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF223E7ERA6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF223E7ERA6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF223E7ERA6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF223E7ERA6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF223E7ERA6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF223E7ERA6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF223E7ERA6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF223E7ERA6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RNF223E7ERA6 AC010141.3-201ENST00000456659 717 ntBASIC18.24■□□□□ 0.51
RNF223E7ERA6 CD99P1-205ENST00000527459 561 ntBASIC18.24■□□□□ 0.51
RNF223E7ERA6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF223E7ERA6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF223E7ERA6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RNF223E7ERA6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF223E7ERA6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF223E7ERA6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF223E7ERA6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RNF223E7ERA6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF223E7ERA6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF223E7ERA6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RNF223E7ERA6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF223E7ERA6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RNF223E7ERA6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF223E7ERA6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF223E7ERA6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF223E7ERA6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF223E7ERA6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF223E7ERA6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF223E7ERA6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF223E7ERA6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF223E7ERA6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF223E7ERA6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF223E7ERA6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF223E7ERA6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF223E7ERA6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF223E7ERA6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RNF223E7ERA6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF223E7ERA6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF223E7ERA6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF223E7ERA6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF223E7ERA6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF223E7ERA6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF223E7ERA6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF223E7ERA6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF223E7ERA6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF223E7ERA6 AC138932.3-201ENST00000567634 1902 ntBASIC18.19■□□□□ 0.5
RNF223E7ERA6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF223E7ERA6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF223E7ERA6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF223E7ERA6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF223E7ERA6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF223E7ERA6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RNF223E7ERA6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms