Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01548A6NM66 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC01548A6NM66 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 AL031602.1-201ENST00000633169 911 ntBASIC17.3■□□□□ 0.36
LINC01548A6NM66 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01548A6NM66 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01548A6NM66 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 LINC01960-201ENST00000563759 1884 ntBASIC17.29■□□□□ 0.36
LINC01548A6NM66 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 AP005435.1-201ENST00000529293 1178 ntBASIC17.29■□□□□ 0.36
LINC01548A6NM66 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01548A6NM66 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01548A6NM66 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 IGHV3-19-201ENST00000521488 291 ntBASIC17.28■□□□□ 0.36
LINC01548A6NM66 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01548A6NM66 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01548A6NM66 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC01548A6NM66 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01548A6NM66 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01548A6NM66 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01548A6NM66 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01548A6NM66 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01548A6NM66 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
LINC01548A6NM66 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LINC01548A6NM66 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01548A6NM66 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LINC01548A6NM66 AC087742.1-201ENST00000575880 1738 ntBASIC17.27■□□□□ 0.35
LINC01548A6NM66 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01548A6NM66 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01548A6NM66 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms