Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM43BA6NCK2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.19■■□□□ 1.46
TRIM43BA6NCK2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRIM43BA6NCK2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.19■■□□□ 1.46
TRIM43BA6NCK2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 AC007322.1-201ENST00000426983 750 ntBASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRIM43BA6NCK2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRIM43BA6NCK2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.16■■□□□ 1.46
TRIM43BA6NCK2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRIM43BA6NCK2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
TRIM43BA6NCK2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 SLC29A4P1-201ENST00000398760 971 ntBASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 AC104187.1-201ENST00000607510 612 ntBASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43BA6NCK2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 AC010141.3-201ENST00000456659 717 ntBASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 AC068587.7-201ENST00000641602 218 ntBASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 AC145676.1-201ENST00000514988 2004 ntBASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM43BA6NCK2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43BA6NCK2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 AC004687.1-201ENST00000579003 1625 ntBASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 UBE2DNL-204ENST00000602536 740 ntBASIC24.11■■□□□ 1.45
TRIM43BA6NCK2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms