Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 AC120024.1-201ENST00000562672 995 ntBASIC19.13■□□□□ 0.65
SHISA3A0PJX4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 RNF126P1-201ENST00000567452 1320 ntBASIC19.13■□□□□ 0.65
SHISA3A0PJX4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA3A0PJX4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 Z98882.1-201ENST00000622160 2253 ntBASIC19.12■□□□□ 0.65
SHISA3A0PJX4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 AC092667.1-201ENST00000434301 2586 ntBASIC19.12■□□□□ 0.65
SHISA3A0PJX4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 AL121603.2-201ENST00000557373 2117 ntBASIC19.12■□□□□ 0.65
SHISA3A0PJX4 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.12■□□□□ 0.65
SHISA3A0PJX4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA3A0PJX4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 AC129492.7-201ENST00000622992 756 ntBASIC19.11■□□□□ 0.65
SHISA3A0PJX4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.11■□□□□ 0.65
SHISA3A0PJX4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA3A0PJX4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 AC022616.5-201ENST00000518796 181 ntBASIC19.1■□□□□ 0.65
SHISA3A0PJX4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.1■□□□□ 0.65
SHISA3A0PJX4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 AC019171.1-201ENST00000601251 1056 ntBASIC19.09■□□□□ 0.65
SHISA3A0PJX4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SHISA3A0PJX4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SHISA3A0PJX4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SHISA3A0PJX4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHISA3A0PJX4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHISA3A0PJX4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHISA3A0PJX4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHISA3A0PJX4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.08■□□□□ 0.64
SHISA3A0PJX4 MIR4281-201ENST00000580852 62 ntBASIC19.08■□□□□ 0.64
SHISA3A0PJX4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHISA3A0PJX4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.08■□□□□ 0.64
SHISA3A0PJX4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.08■□□□□ 0.64
SHISA3A0PJX4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms