Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AL033527.3-201ENST00000566366 1196 ntBASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV21A0A0B4J279 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV21A0A0B4J279 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV21A0A0B4J279 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAV21A0A0B4J279 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 BX664725.1-201ENST00000438252 379 ntBASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV21A0A0B4J279 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 LINC01960-201ENST00000563759 1884 ntBASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
TRAV21A0A0B4J279 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 DUX4L4-201ENST00000566884 1269 ntBASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 AC021242.3-201ENST00000607598 1377 ntBASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV21A0A0B4J279 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRAV21A0A0B4J279 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV21A0A0B4J279 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV21A0A0B4J279 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms