Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV19A0A0A6YYK7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV19A0A0A6YYK7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 BX005040.4-201ENST00000637145 1518 ntBASIC22.77■■□□□ 1.24
TRAV19A0A0A6YYK7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
TRAV19A0A0A6YYK7 AC092068.2-201ENST00000590491 1708 ntBASIC22.77■■□□□ 1.23
TRAV19A0A0A6YYK7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 TPRG1LP1-201ENST00000598702 760 ntBASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 OXCT2P1-201ENST00000447263 1535 ntBASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV19A0A0A6YYK7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 SMUG1P1-201ENST00000590640 811 ntBASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV19A0A0A6YYK7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.74■■□□□ 1.23
TRAV19A0A0A6YYK7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
TRAV19A0A0A6YYK7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 AC092437.1-201ENST00000624794 1048 ntBASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV19A0A0A6YYK7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 DUSP8P3-201ENST00000399571 1760 ntBASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.71■■□□□ 1.23
TRAV19A0A0A6YYK7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRAV19A0A0A6YYK7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRAV19A0A0A6YYK7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 RARRES2P11-201ENST00000635158 484 ntBASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV19A0A0A6YYK7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms