Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 MIR663A-201ENST00000385250 93 ntBASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AC079140.4-201ENST00000507448 529 ntBASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P11-201ENST00000435214 1283 ntBASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AL353803.4-201ENST00000565882 1934 ntBASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 GPX1P1-201ENST00000388829 606 ntBASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
MSANTD3-TMEFF1A0A0A6YYJ0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.76■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.75■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 MFSD11-216ENST00000590393 1141 ntBASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM191A-211ENST00000637163 1067 ntBASIC21.72■■□□□ 1.07
MSANTD3-TMEFF1A0A0A6YYJ0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms