Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV6-7A0A0A0MS04 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV6-7A0A0A0MS04 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV6-7A0A0A0MS04 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRBV6-7A0A0A0MS04 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV6-7A0A0A0MS04 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 BX664725.1-201ENST00000438252 379 ntBASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 DUX4L4-201ENST00000566884 1269 ntBASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC092667.1-201ENST00000434301 2586 ntBASIC18.28■□□□□ 0.52
TRBV6-7A0A0A0MS04 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 AC009086.3-201ENST00000623486 1008 ntBASIC18.27■□□□□ 0.52
TRBV6-7A0A0A0MS04 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms