Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 AC104771.1-201ENST00000603335 964 ntBASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 AC079630.1-202ENST00000618127 1840 ntBASIC20.9■□□□□ 0.94
CCDC187A0A096LP49 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC187A0A096LP49 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC187A0A096LP49 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC187A0A096LP49 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC187A0A096LP49 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC187A0A096LP49 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC187A0A096LP49 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC187A0A096LP49 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC187A0A096LP49 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 AC079140.4-201ENST00000507448 529 ntBASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC187A0A096LP49 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 CROCCP5-201ENST00000436658 830 ntBASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 AL109923.1-201ENST00000618799 583 ntBASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC187A0A096LP49 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 AC011767.1-201ENST00000617410 1153 ntBASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC187A0A096LP49 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 OXCT2P1-201ENST00000447263 1535 ntBASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 AL355802.2-201ENST00000402069 882 ntBASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC187A0A096LP49 ESRRAP2-201ENST00000418437 1549 ntBASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC187A0A096LP49 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC187A0A096LP49 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms