Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SATB2Q9UPW6 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 POM121L14P-201ENST00000406100 1558 ntBASIC12.77□□□□□ -0.36
SATB2Q9UPW6 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 HERC2P9-206ENST00000529624 5187 ntBASIC12.77□□□□□ -0.36
SATB2Q9UPW6 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SATB2Q9UPW6 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 RPL18AP15-201ENST00000430258 517 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 HNRNPA1P3-201ENST00000440968 551 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 IGKV1OR-2-201ENST00000457995 350 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AP001102.1-201ENST00000528959 409 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 CDC37P2-201ENST00000562287 1029 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AC148476.1-201ENST00000622182 705 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AC138627.1-201ENST00000641127 1257 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AP000437.1-201ENST00000624057 2085 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 AC012358.2-201ENST00000430010 1434 ntBASIC12.77□□□□□ -0.37
SATB2Q9UPW6 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SATB2Q9UPW6 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC125807.2-201ENST00000513358 3514 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AL356653.1-201ENST00000402743 360 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CRIP1P2-201ENST00000425396 228 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC105443.1-201ENST00000433754 712 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 FAM86JP-202ENST00000484500 988 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms