Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PRR20FP-201ENST00000603320 180 ntBASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AC006548.2-201ENST00000605217 529 ntBASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AC108673.2-201ENST00000608909 565 ntBASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AC025278.3-201ENST00000636139 796 ntBASIC13.7□□□□□ -0.22
LMO3Q8TAP4 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PKM-222ENST00000568883 1863 ntTSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 CACYBPP3-201ENST00000406011 625 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 RBMX2P5-201ENST00000424312 969 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 YBX1P3-201ENST00000468366 909 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 KRT18P42-201ENST00000505048 1255 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 MIR4688-201ENST00000577966 83 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 PRMT1P1-201ENST00000604252 1009 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 AC087893.1-201ENST00000612818 664 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 AC095350.1-201ENST00000443685 1711 ntTSL 5 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 TEF-202ENST00000406644 4386 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC13.69□□□□□ -0.22
LMO3Q8TAP4 BX324167.2-201ENST00000623717 3316 ntBASIC13.69□□□□□ -0.22
LMO3Q8TAP4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AC005682.1-201ENST00000452069 1467 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 COX20P1-201ENST00000366529 357 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 HNRNPA1P25-201ENST00000422644 937 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AC023162.1-201ENST00000505608 474 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 MIR4539-201ENST00000579784 60 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 Z93930.2-203ENST00000585003 516 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AL033381.2-201ENST00000603854 732 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms