Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 AC037459.3-201ENST00000521025 2750 ntBASIC12.27□□□□□ -0.45
CLK1P49759 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 MXRA5Y-201ENST00000420610 8000 ntBASIC12.27□□□□□ -0.45
CLK1P49759 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CLK1P49759 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CLK1P49759 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 CFL1P6-201ENST00000400899 494 ntBASIC12.26□□□□□ -0.45
CLK1P49759 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 RPL35P9-201ENST00000446059 350 ntBASIC12.26□□□□□ -0.45
CLK1P49759 GULOP-201ENST00000454030 748 ntBASIC12.26□□□□□ -0.45
CLK1P49759 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.26□□□□□ -0.45
CLK1P49759 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 TMCO5B-205ENST00000530020 894 ntBASIC12.26□□□□□ -0.45
CLK1P49759 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.26□□□□□ -0.45
CLK1P49759 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.26□□□□□ -0.45
CLK1P49759 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLK1P49759 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.26□□□□□ -0.45
CLK1P49759 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CLK1P49759 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms