Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
O00370 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.8□□□□□ -0.2
O00370 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
O00370 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
O00370 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
O00370 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
O00370 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC13.8□□□□□ -0.2
O00370 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
O00370 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
O00370 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
O00370 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC13.79□□□□□ -0.2
O00370 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.79□□□□□ -0.2
O00370 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.79□□□□□ -0.2
O00370 MARCKSL1P2-201ENST00000401037 976 ntBASIC13.79□□□□□ -0.2
O00370 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 RPL3P5-201ENST00000441645 1232 ntBASIC13.79□□□□□ -0.2
O00370 AC114501.1-201ENST00000445949 172 ntBASIC13.79□□□□□ -0.2
O00370 P2RX6P-202ENST00000450626 357 ntBASIC13.79□□□□□ -0.2
O00370 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.79□□□□□ -0.2
O00370 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.79□□□□□ -0.2
O00370 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 AP001102.1-201ENST00000528959 409 ntBASIC13.79□□□□□ -0.2
O00370 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 AP003170.2-201ENST00000544730 786 ntBASIC13.79□□□□□ -0.2
O00370 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.79□□□□□ -0.2
O00370 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 RN7SL678P-201ENST00000579533 299 ntBASIC13.79□□□□□ -0.2
O00370 TRMT112P6-201ENST00000599234 372 ntBASIC13.79□□□□□ -0.2
O00370 AC006548.2-201ENST00000605217 529 ntBASIC13.79□□□□□ -0.2
O00370 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.79□□□□□ -0.2
O00370 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
O00370 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.79□□□□□ -0.2
O00370 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
O00370 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 AC126564.1-201ENST00000623628 2013 ntBASIC13.79□□□□□ -0.2
O00370 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.79□□□□□ -0.2
O00370 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
O00370 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC13.79□□□□□ -0.2
O00370 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC13.78□□□□□ -0.2
O00370 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC13.78□□□□□ -0.2
O00370 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
O00370 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC13.78□□□□□ -0.2
O00370 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
O00370 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC13.78□□□□□ -0.2
O00370 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
O00370 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC13.78□□□□□ -0.2
O00370 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC13.78□□□□□ -0.2
O00370 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.78□□□□□ -0.2
O00370 ASLP1-201ENST00000428790 637 ntBASIC13.78□□□□□ -0.2
O00370 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.78□□□□□ -0.2
O00370 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC13.78□□□□□ -0.2
O00370 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
O00370 AC244197.1-201ENST00000456494 951 ntBASIC13.78□□□□□ -0.2
O00370 RN7SL684P-201ENST00000465665 294 ntBASIC13.78□□□□□ -0.2
O00370 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
O00370 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms