Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.28□□□□□ -0.44
CLK1P49759 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.28□□□□□ -0.44
CLK1P49759 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.28□□□□□ -0.44
CLK1P49759 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.28□□□□□ -0.44
CLK1P49759 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.28□□□□□ -0.44
CLK1P49759 VENTXP3-201ENST00000546480 773 ntBASIC12.28□□□□□ -0.44
CLK1P49759 AC079328.1-201ENST00000560358 952 ntBASIC12.28□□□□□ -0.44
CLK1P49759 MIR3180-2-201ENST00000581748 88 ntBASIC12.28□□□□□ -0.44
CLK1P49759 RPL17P45-201ENST00000586289 509 ntBASIC12.28□□□□□ -0.44
CLK1P49759 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.28□□□□□ -0.44
CLK1P49759 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 AC092171.5-201ENST00000608012 942 ntBASIC12.28□□□□□ -0.44
CLK1P49759 AL591926.3-201ENST00000611630 238 ntBASIC12.28□□□□□ -0.44
CLK1P49759 COX6A1P2-201ENST00000620597 330 ntBASIC12.28□□□□□ -0.44
CLK1P49759 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 AC005618.3-201ENST00000624928 458 ntBASIC12.28□□□□□ -0.44
CLK1P49759 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 AC068587.10-201ENST00000641210 219 ntBASIC12.28□□□□□ -0.44
CLK1P49759 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CLK1P49759 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC12.27□□□□□ -0.44
CLK1P49759 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLK1P49759 AL450468.2-201ENST00000565955 1889 ntBASIC12.27□□□□□ -0.44
CLK1P49759 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLK1P49759 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLK1P49759 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.27□□□□□ -0.44
CLK1P49759 AC012313.8-201ENST00000595059 5402 ntBASIC12.27□□□□□ -0.44
CLK1P49759 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CLK1P49759 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLK1P49759 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLK1P49759 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CLK1P49759 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLK1P49759 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 ACTG1P19-201ENST00000418987 1116 ntBASIC12.27□□□□□ -0.45
CLK1P49759 AC103563.1-201ENST00000429316 123 ntBASIC12.27□□□□□ -0.45
CLK1P49759 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 AC098935.1-201ENST00000446057 611 ntBASIC12.27□□□□□ -0.45
CLK1P49759 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 RNA5SP423-201ENST00000517127 109 ntBASIC12.27□□□□□ -0.45
CLK1P49759 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.27□□□□□ -0.45
CLK1P49759 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.27□□□□□ -0.45
CLK1P49759 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.27□□□□□ -0.45
CLK1P49759 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 AC005777.1-201ENST00000588332 187 ntBASIC12.27□□□□□ -0.45
CLK1P49759 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.27□□□□□ -0.45
CLK1P49759 AC016629.1-201ENST00000596579 586 ntBASIC12.27□□□□□ -0.45
CLK1P49759 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
CLK1P49759 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.27□□□□□ -0.45
CLK1P49759 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.27□□□□□ -0.45
CLK1P49759 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.27□□□□□ -0.45
CLK1P49759 AC026120.2-201ENST00000617239 309 ntBASIC12.27□□□□□ -0.45
CLK1P49759 YRDCP1-201ENST00000621419 643 ntBASIC12.27□□□□□ -0.45
CLK1P49759 Z82244.1-201ENST00000631502 840 ntBASIC12.27□□□□□ -0.45
CLK1P49759 STX16-205ENST00000361830 4318 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.27□□□□□ -0.45
CLK1P49759 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLK1P49759 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLK1P49759 AC006480.2-201ENST00000609770 1337 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms