Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SLC1A1P43005 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SLC1A1P43005 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC13.54□□□□□ -0.24
SLC1A1P43005 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 HLA-DMA-202ENST00000395303 1007 ntBASIC13.54□□□□□ -0.24
SLC1A1P43005 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 RBMXP2-201ENST00000434705 1168 ntBASIC13.54□□□□□ -0.24
SLC1A1P43005 AL356000.1-201ENST00000441073 1238 ntBASIC13.54□□□□□ -0.24
SLC1A1P43005 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.54□□□□□ -0.24
SLC1A1P43005 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC13.54□□□□□ -0.24
SLC1A1P43005 ALG1L7P-201ENST00000502317 768 ntBASIC13.54□□□□□ -0.24
SLC1A1P43005 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC13.54□□□□□ -0.24
SLC1A1P43005 AP000894.1-201ENST00000584430 520 ntBASIC13.54□□□□□ -0.24
SLC1A1P43005 AC008972.2-201ENST00000606587 494 ntBASIC13.54□□□□□ -0.24
SLC1A1P43005 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.54□□□□□ -0.24
SLC1A1P43005 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SLC1A1P43005 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC13.54□□□□□ -0.24
SLC1A1P43005 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 APOL3-201ENST00000349314 2117 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC1A1P43005 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC1A1P43005 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SLC1A1P43005 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SLC1A1P43005 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SLC1A1P43005 AL357563.1-201ENST00000404728 395 ntBASIC13.53□□□□□ -0.24
SLC1A1P43005 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.53□□□□□ -0.24
SLC1A1P43005 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 HIST1H2APS2-201ENST00000454426 370 ntBASIC13.53□□□□□ -0.24
SLC1A1P43005 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 OR4A49P-201ENST00000527050 632 ntBASIC13.53□□□□□ -0.24
SLC1A1P43005 PHBP18-201ENST00000546648 813 ntBASIC13.53□□□□□ -0.24
SLC1A1P43005 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 AC138466.5-201ENST00000624002 808 ntBASIC13.53□□□□□ -0.24
SLC1A1P43005 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SLC1A1P43005 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 HADH-210ENST00000626637 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC1A1P43005 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC13.53□□□□□ -0.24
SLC1A1P43005 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SLC1A1P43005 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC1A1P43005 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
SLC1A1P43005 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SLC1A1P43005 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC13.52□□□□□ -0.24
SLC1A1P43005 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC1A1P43005 DNM1P41-201ENST00000623634 3350 ntBASIC13.52□□□□□ -0.25
SLC1A1P43005 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 KRT18P39-201ENST00000415349 1299 ntBASIC13.52□□□□□ -0.25
SLC1A1P43005 RPSAP31-201ENST00000416648 895 ntBASIC13.52□□□□□ -0.25
SLC1A1P43005 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms