Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PRADC1P1-201ENST00000412317 525 ntBASIC13.83□□□□□ -0.2
O00370 AC005822.1-201ENST00000414124 1034 ntBASIC13.83□□□□□ -0.2
O00370 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.83□□□□□ -0.2
O00370 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 HLA-W-207ENST00000439514 771 ntBASIC13.83□□□□□ -0.2
O00370 AC092896.1-201ENST00000465850 380 ntBASIC13.83□□□□□ -0.2
O00370 HNRNPA1P4-201ENST00000509706 756 ntBASIC13.83□□□□□ -0.2
O00370 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.83□□□□□ -0.2
O00370 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.83□□□□□ -0.2
O00370 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.83□□□□□ -0.2
O00370 CCND3P2-201ENST00000579393 537 ntBASIC13.83□□□□□ -0.2
O00370 AP005212.2-201ENST00000584979 510 ntBASIC13.83□□□□□ -0.2
O00370 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.83□□□□□ -0.2
O00370 AC008622.3-201ENST00000621170 600 ntBASIC13.83□□□□□ -0.2
O00370 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
O00370 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
O00370 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 FAM90A17P-201ENST00000533716 1957 ntBASIC13.83□□□□□ -0.2
O00370 AC010182.1-201ENST00000548943 2434 ntBASIC13.83□□□□□ -0.2
O00370 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
O00370 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
O00370 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC13.83□□□□□ -0.2
O00370 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
O00370 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC13.83□□□□□ -0.2
O00370 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
O00370 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
O00370 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
O00370 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
O00370 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.82□□□□□ -0.2
O00370 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 DNM1P41-201ENST00000623634 3350 ntBASIC13.82□□□□□ -0.2
O00370 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 AC011239.2-201ENST00000624820 1489 ntBASIC13.82□□□□□ -0.2
O00370 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
O00370 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.82□□□□□ -0.2
O00370 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC13.82□□□□□ -0.2
O00370 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
O00370 AC024475.2-201ENST00000312173 879 ntBASIC13.82□□□□□ -0.2
O00370 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
O00370 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
O00370 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 AL355334.1-201ENST00000417713 215 ntBASIC13.82□□□□□ -0.2
O00370 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.82□□□□□ -0.2
O00370 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
O00370 DUX4L31-201ENST00000446466 1136 ntBASIC13.82□□□□□ -0.2
O00370 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 DEFA8P-201ENST00000457582 285 ntBASIC13.82□□□□□ -0.2
O00370 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
O00370 AC023051.2-201ENST00000541141 460 ntBASIC13.82□□□□□ -0.2
O00370 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC13.82□□□□□ -0.2
O00370 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.82□□□□□ -0.2
O00370 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
O00370 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC13.82□□□□□ -0.2
O00370 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
O00370 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 OR10N1P-203ENST00000641736 1305 ntBASIC13.82□□□□□ -0.2
O00370 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC13.82□□□□□ -0.2
O00370 AL354861.3-201ENST00000600140 2412 ntBASIC13.82□□□□□ -0.2
O00370 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
O00370 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms