Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.32□□□□□ -0.44
SCN2BO60939 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.32□□□□□ -0.44
SCN2BO60939 AC010326.4-202ENST00000603829 541 ntBASIC12.32□□□□□ -0.44
SCN2BO60939 AC010326.4-201ENST00000604665 891 ntBASIC12.32□□□□□ -0.44
SCN2BO60939 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC12.32□□□□□ -0.44
SCN2BO60939 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SCN2BO60939 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 AC010182.1-201ENST00000548943 2434 ntBASIC12.32□□□□□ -0.44
SCN2BO60939 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC12.32□□□□□ -0.44
SCN2BO60939 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SCN2BO60939 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SCN2BO60939 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.31□□□□□ -0.44
SCN2BO60939 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 OR7E155P-201ENST00000412208 1014 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.31□□□□□ -0.44
SCN2BO60939 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 GALP-202ENST00000440823 889 ntTSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 NOC2LP1-201ENST00000450578 752 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC12.31□□□□□ -0.44
SCN2BO60939 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.31□□□□□ -0.44
SCN2BO60939 FAM86B3P-203ENST00000523992 854 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC12.31□□□□□ -0.44
SCN2BO60939 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.31□□□□□ -0.44
SCN2BO60939 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC12.31□□□□□ -0.44
SCN2BO60939 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.31□□□□□ -0.44
SCN2BO60939 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 AC068338.3-201ENST00000617892 418 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 AC073869.4-201ENST00000620841 800 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 AC073911.3-201ENST00000624401 631 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC12.31□□□□□ -0.44
SCN2BO60939 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 AHCYP7-201ENST00000560847 1308 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 AC008038.1-201ENST00000634247 1314 ntBASIC12.31□□□□□ -0.44
SCN2BO60939 TPRX1-203ENST00000543508 1526 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
SCN2BO60939 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCN2BO60939 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SCN2BO60939 AC064850.1-201ENST00000413279 1398 ntBASIC12.3□□□□□ -0.44
SCN2BO60939 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms