Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SLC1A1P43005 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC009108.4-201ENST00000623284 2451 ntBASIC13.61□□□□□ -0.23
SLC1A1P43005 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SLC1A1P43005 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.61□□□□□ -0.23
SLC1A1P43005 KRT18P4-201ENST00000422599 1288 ntBASIC13.61□□□□□ -0.23
SLC1A1P43005 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.61□□□□□ -0.23
SLC1A1P43005 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC13.61□□□□□ -0.23
SLC1A1P43005 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC13.61□□□□□ -0.23
SLC1A1P43005 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC068338.3-201ENST00000617892 418 ntBASIC13.61□□□□□ -0.23
SLC1A1P43005 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AC128714.1-201ENST00000637035 887 ntBASIC13.61□□□□□ -0.23
SLC1A1P43005 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 AL132642.2-201ENST00000623423 1998 ntBASIC13.61□□□□□ -0.23
SLC1A1P43005 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC13.61□□□□□ -0.23
SLC1A1P43005 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SLC1A1P43005 AP001972.5-201ENST00000624624 2338 ntBASIC13.61□□□□□ -0.23
SLC1A1P43005 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC13.61□□□□□ -0.23
SLC1A1P43005 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 IMPDH1P8-201ENST00000413639 1525 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 BX537318.2-201ENST00000624893 4162 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC1A1P43005 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC1A1P43005 KRT8P38-201ENST00000441370 1430 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 AC112250.1-201ENST00000504640 745 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 MIR5091-201ENST00000578707 93 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 AC073352.2-201ENST00000609385 439 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms