Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SLC1A1P43005 HRC-203ENST00000595625 2044 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 AC005549.1-201ENST00000579438 1629 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 RNA5SP248-201ENST00000365602 127 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 HNRNPA1P8-201ENST00000436090 951 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 AC079112.1-201ENST00000454972 939 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 BICD1P1-201ENST00000457832 1222 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.66□□□□□ -0.22
SLC1A1P43005 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.66□□□□□ -0.22
SLC1A1P43005 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.66□□□□□ -0.22
SLC1A1P43005 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SLC1A1P43005 GOLGA2P7-209ENST00000560408 745 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 TRMT112P3-201ENST00000580149 358 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SLC1A1P43005 AC010326.4-202ENST00000603829 541 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 AC010326.4-201ENST00000604665 891 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 MDC1-209ENST00000613547 830 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.66□□□□□ -0.22
SLC1A1P43005 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SLC1A1P43005 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC1A1P43005 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC1A1P43005 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SLC1A1P43005 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC108734.2-201ENST00000420887 1069 ntBASIC13.65□□□□□ -0.22
SLC1A1P43005 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.65□□□□□ -0.22
SLC1A1P43005 VDAC1P11-201ENST00000458323 852 ntBASIC13.65□□□□□ -0.22
SLC1A1P43005 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.65□□□□□ -0.22
SLC1A1P43005 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC106872.11-201ENST00000605838 421 ntBASIC13.65□□□□□ -0.22
SLC1A1P43005 AC010503.4-201ENST00000615487 688 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms