Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB9F8W1W9 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB9F8W1W9 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
NPIPB9F8W1W9 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB9F8W1W9 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB9F8W1W9 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
NPIPB9F8W1W9 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 POM121L7P-201ENST00000329949 2404 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 MARCKSL1P2-201ENST00000401037 976 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 RN7SL789P-201ENST00000478944 293 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 HNRNPA1P55-201ENST00000505935 955 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SEPHS2P1-201ENST00000511618 1162 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC010202.1-201ENST00000551181 405 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC010326.4-202ENST00000603829 541 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC010326.4-201ENST00000604665 891 ntBASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB9F8W1W9 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPB9F8W1W9 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AC025538.1-201ENST00000510707 1486 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 CYP51A1P3-201ENST00000400072 1428 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 SLC25A6P1-201ENST00000412123 775 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 KRT18P39-201ENST00000415349 1299 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 VENTXP4-201ENST00000449029 958 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 RN7SL288P-201ENST00000490496 291 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AC055811.3-201ENST00000584952 686 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AC008622.3-201ENST00000621170 600 ntBASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB9F8W1W9 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms