Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 AL161729.1-201ENST00000604104 1402 ntBASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 MIR4787-201ENST00000607364 84 ntBASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 AF131216.4-201ENST00000638924 1588 ntBASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4B1Q9Y6B7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.96■□□□□ 0.95
AP4B1Q9Y6B7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4B1Q9Y6B7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 GUSBP5-201ENST00000418136 578 ntBASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4B1Q9Y6B7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4B1Q9Y6B7 AC092667.1-201ENST00000434301 2586 ntBASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
AP4B1Q9Y6B7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms